Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1642g00001 ATGTGTGGAGGTGCTATTATTTCAGGCTTCATTGGTGTGAACCATGGCCGCAACCTCGCCGCACAGGAACTATGGTCCGAGCTCGACCCTTTCTCTGACCTCCTACCCTTCGACACCGCCGTCACCGCAGCTACTTCCAAATACCAACCACCCCTGCCCAAAATTCCAGACAAAAAAGTGGTAGCATGTGACAAGAAGAGGAAAAGCCTGGGTGCAGAAAAGGGTGCAGGATCAGGAAAGAAGAGTGAGCGAGCTCGGAAGAACGTGTACAGAGGAATCAGGCAAAGGCCATGGGGTAAGTGGGCCGCTGAGATAAGGGACCCACACAAGGGTGTCCGCGTCTGGCTGGGCACCTTCCCCACCGCCGAAGAGGCTGCCAGAGCCTACGACGACGCCGCCATACGCATCCGCGGCGACAAGGCCAAGCTCAACTTCCCCGCCACTCCGCCACCACCCTCCAAGAAGCGCTGCCTCACCCCTGACCTCACTGAACAAAGCAGCTCCCGCTCCACCGGACCACCTCCTTCCGCCTCCGTCCACGGCGGAGATGAGGAACTCGACCTGAAAGAACAAATCTCGAACCTCGAATGGTTCCTCGGCTTGGAGAACGAGCAGGCAGTGACAAGTGGCGTTGAGTGGGGCAACGGTTATGTGGATGACCTGTGGATGCTTGACGACGTCGTTATGCCCGACCGTCACCTGGTTTACTAG 711 0.5781 MCGGAIISGFIGVNHGRNLAAQELWSELDPFSDLLPFDTAVTAATSKYQPPLPKIPDKKVVACDKKRKSLGAEKGAGSGKKSERARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFPTAEEAARAYDDAAIRIRGDKAKLNFPATPPPPSKKRCLTPDLTEQSSSRSTGPPPSASVHGGDEELDLKEQISNLEWFLGLENEQAVTSGVEWGNGYVDDLWMLDDVVMPDRHLVY 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1642g00001 236 SMART rav1_2 89 152 IPR001471 GO:0003700|GO:0006355
Mupr1642g00001 236 Pfam AP2 domain 89 138 IPR001471 GO:0003700|GO:0006355
Mupr1642g00001 236 CDD AP2 90 148 IPR001471 GO:0003700|GO:0006355
Mupr1642g00001 236 Gene3D AP2/ERF domain 89 147 IPR036955 GO:0003700|GO:0006355
Mupr1642g00001 236 PANTHER DNA-BINDING DOMAIN 78 167 IPR044808 GO:0003700|GO:0009873
Mupr1642g00001 236 SUPERFAMILY DNA-binding domain 89 147 IPR016177 GO:0003677
Mupr1642g00001 236 PRINTS Ethylene responsive element binding protein signature 90 101 IPR001471 GO:0003700|GO:0006355
Mupr1642g00001 236 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Mupr1642g00001 236 MobiDBLite consensus disorder prediction 141 182 - -
Mupr1642g00001 236 MobiDBLite consensus disorder prediction 159 175 - -
Mupr1642g00001 236 ProSiteProfiles AP2/ERF domain profile. 89 146 IPR001471 GO:0003700|GO:0006355
Mupr1642g00001 236 FunFam Ethylene-responsive transcription factor 2 88 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1642g00001 Mupr-Chr1642 9497 11045 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1642g00001 1 228 AP2-EREBP Transcription Factor Family AT3G16770 44.656 3.73e-53 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr1642g00001 AP2 1.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1642g00001 K09286 - gmx:100779626 293.123