Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16422g00003 ATGGATCATCAACAGGGAAGTCAACCTTCTTCCACCAAAGTCGAAAGAAGAATCGTAGAGAAAAACCGGAGAAACCAGATGAAGAACCTCTTTTCCCAACTCTACTCTCTTCTTCCGAACTATGATCCCAAGGAAACGATACCAATGCCTGATCAAATAGATGAAGCAATCAACCACATAAAAAGCCTAGAGAGAAAAGTGAAGGTGGCGCAGGAGAAGAAAGAAAGGTTAATGGAAAGGAAGAGAAGTCGTACTGGCTGCTCCAGTGCTTCTGAAACACAACGTCGCCAAAAATCGCCAAAAATCGAGATTCATGAAACGGGTTCTTTGCTCCAAGTCATTCTAACATGCGGGGTCGATAACGAGTTCATTTTCTGTGAAATTATTCGAATTTTGCATGAGGAGAACGTGGACGTGATCACTGTCAATTCTTCAATGGTTGGAGATTCAATGCTTCATGTTGTGCACGGGGAGGTTCCGCAATCTAGCTTTGAATTTGGAGTGATCAAAGTGAGTGAGAAGCTTAAAAGGTTTGTAAACGGATCCGTGAGTGATGTGGAAATGGAGCTTGAATTCAGTGATTTATGGGATTTTGAAATTGGTACTACTGACGCGTGGAGGCTTCTAGATCCTACTATATTAGACATCTGTTTGCCACCGAATCATCCGTTGTAA 675 0.4237 MDHQQGSQPSSTKVERRIVEKNRRNQMKNLFSQLYSLLPNYDPKETIPMPDQIDEAINHIKSLERKVKVAQEKKERLMERKRSRTGCSSASETQRRQKSPKIEIHETGSLLQVILTCGVDNEFIFCEIIRILHEENVDVITVNSSMVGDSMLHVVHGEVPQSSFEFGVIKVSEKLKRFVNGSVSDVEMELEFSDLWDFEIGTTDAWRLLDPTILDICLPPNHPL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16422g00003 224 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 11 63 IPR011598 GO:0046983
Mupr16422g00003 224 FunFam Transcription factor bHLH162 5 89 - -
Mupr16422g00003 224 MobiDBLite consensus disorder prediction 74 101 - -
Mupr16422g00003 224 Gene3D - 3 95 IPR036638 GO:0046983
Mupr16422g00003 224 Coils Coil 53 80 - -
Mupr16422g00003 224 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 83 IPR036638 GO:0046983
Mupr16422g00003 224 Pfam Helix-loop-helix DNA-binding domain 14 64 IPR011598 GO:0046983
Mupr16422g00003 224 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16422g00003 Mupr-Chr16422 11979 12948 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16422g00003 1 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 36.316 8.62e-33 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr16422g00003 HLH 9.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16422g00003 - - gmx:100784042 303.138