Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16421g00001 ATGGTAAAATCACTGCCAAATCGACATAGAAGCCTTCAATATCCTTCTATGATGAAAGTGGGATTTGAGGTGGTTCATGCAAATCCAAACATGATTCGTCCACACATGCATGAAACATGGGATCACTACTCAAATATCACTACCTTGCCATTTTCAGCTCCAATTACCCCATCAAACCCATATCCAAAGCCAGCATCAGAAAACTTAAACCACTGCCTAAACTTGGGGCAGAATGAACTATGTGATTGGGTGGAGGATCACATTAGTGACATCACCAAACACCTTGTAGAAGACTTACCAGAAACCACTTCTGATAACTTGATGCCCAATAACACAACAAGGGTTTCCCATCACAACCTTGTTCCCTCACTTTCACCCAACTTCAGTCAAAGAAAACCCTCATGTTTTAGACCCCAATTTGACTCCTTCCCCAACGACCCCCCAAACTTCAATATTCACATTCAAACAAACACCTCAAGTTTAGATCAAAACCACAATGGTTATGATCAAGGGTTGAACCTAATAACCCTTCTAATGGAGTGTGCAGTGGCAATCTCAGTTGACAACCTGGGAGAGGCTCACAGGATGTTGCTGGAGCTAACACAAGTGGCCTCGCCCTACAAAGCATCATGTGCCGAACGTGTTGTTGCTTATTTTGCAAAATCCATGGCTAGCAGGGTGATGAATTCTTGGCTTGGTGTGTGTTCCCCTTTGGTTGATCACAGAAGCATAAACTCAGCATTCCAAGTGTTCAACAACGTTTCCCCTTTCATCAAATTCGCTCACTTCACTTCCAACCAGGCAATTCTAGAGGCAGTGAGCCATTGTGACAGCATTCACATAATTGACTTGGACATCATGCAGGGGCTGCAATGGCCAGCCTTTTTCCACATATTAGCCACCAGAATGGAGGGTCCACCACAGGTCACAATGACAGGTTTGGGAACCTCAATGGACCTCCTTGTTGAAACAGGAAAACAACTCTCAAACTTTGCAAGAAGGCTTGGCATGTCACTCAAGTTCCACCCCATTGCAAGCAGGTTTGGGGAGGTTCTAGATGTGTCCATGTTGCAAGTGAAGCCTGGTGAGGCAGTGGCAGTGCATTGGCTGCAGCATTCACTGTATGATGCAACTGGACCTGATTGGAAAACATTGAGGCTTCTTGAGGAGTTGGAGCCAACAATCATCACCTTGGTGGAGCAGGATGTGAACCATGGAGGGGCTTTCTTGGACCGTTTTGTGGCCTCCTTGCACTACTACTCCACCCTTTTTGATTCTCTTGGAGCTTATTTGCACTATGATGATGCTAATAGGCACCATGTGGAACATGGCCTTTTCTCTAGGGAGATCAACAATGTGTTGGCCATTGGAGGCCCTAAGAGGAATGGTGATGACAAGTTTAGGCAGTGGAGAAGTGAGCTGGCTAGCCACTCTTTTGTGCAGGTTCCAATGAGTGCCAATTCAATGGCTCAAGCACAGTTGATATTGAACATGTTCTCACCAGCTTTTGGGTATAGCCTTGCCCAACTTGAGGGTACATTAAGGCTTGGATGGAAGGATACAAGCTTGTACACTGCTTCTGCATGGACCTGCACAACTTCTACCCAGTTAGCTTAA 1617 0.4558 MVKSLPNRHRSLQYPSMMKVGFEVVHANPNMIRPHMHETWDHYSNITTLPFSAPITPSNPYPKPASENLNHCLNLGQNELCDWVEDHISDITKHLVEDLPETTSDNLMPNNTTRVSHHNLVPSLSPNFSQRKPSCFRPQFDSFPNDPPNFNIHIQTNTSSLDQNHNGYDQGLNLITLLMECAVAISVDNLGEAHRMLLELTQVASPYKASCAERVVAYFAKSMASRVMNSWLGVCSPLVDHRSINSAFQVFNNVSPFIKFAHFTSNQAILEAVSHCDSIHIIDLDIMQGLQWPAFFHILATRMEGPPQVTMTGLGTSMDLLVETGKQLSNFARRLGMSLKFHPIASRFGEVLDVSMLQVKPGEAVAVHWLQHSLYDATGPDWKTLRLLEELEPTIITLVEQDVNHGGAFLDRFVASLHYYSTLFDSLGAYLHYDDANRHHVEHGLFSREINNVLAIGGPKRNGDDKFRQWRSELASHSFVQVPMSANSMAQAQLILNMFSPAFGYSLAQLEGTLRLGWKDTSLYTASAWTCTTSTQLA 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16421g00001 538 Pfam GRAS domain family 174 530 IPR005202 -
Mupr16421g00001 538 ProSiteProfiles GRAS family profile. 165 530 IPR005202 -
Mupr16421g00001 538 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 139 526 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16421g00001 Mupr-Chr16421 3171 5058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16421g00001 169 530 GRAS Transcription Factor Family AT3G54220 54.472 2.93e-133 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mupr16421g00001 GRAS 4.6e-103 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16421g00001 - - gmx:100775656 925.235