Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16408g00001 ATGGCTTCTTCTAATAGACACTGGCCAAGCATGTTCAAGTCTAAGCCCTGCAACCCTCACCACCAATGGCAGCACGACATCAACTCTTCTCTCATCTCAACCGGTTGCCACAGAAGCCCTTACACTTCAGGAGGGGGTTGCGAGGAGAGAAGTCCAGAGCCAAAGCCAAGGTGGAACCCAAAACCTGAGCAAATTCGCATTCTGGAGGCTATATTCAACTCTGGAATGGTGAATCCTCCGAGGGATGAGATAAGGAAGATAAGGGCACAACTGCAAGAGTATGGCCAAGTGGGTGATGCCAATGTCTTCTATTGGTTCCAGAACCGCAAATCAAGGAGCAAACACAAGCTTCGCCATCTCCAAAACTCAAAGAACCTTGAAACCCAACAAAACCCCACATCGCTCCCTCAAATAACTGCACCCTCATCCTCATCTTCCTCCTCTGAGAAATCCTCTCCCAAAGAAATAATACCCACCAAGGTGTTCTCCATTGGATTCTCCAACGTCACCGATGTGGTGCCTAATTCTCCAACAACTTCTGTGAACCAGACCTACTTTCAAACTCACAATGGGTCTCTGCTTCCACCACCACCACCACCTTCTGCTGCACCAACTGAGGCTTTCTTCTTCCCAGTGCAACATAATGGGCAGGGGGTAGCACCTAGTACAGTGACATCACAAGGGTTTTGCTTCTCTGAGCTGTCCAATGTTGTTCATGCGCAATCACATGCTCAGCATCACGTTGGTCCTTGCACTAGCCTTTTGCTTAGTGAGATCGTAAGCCACGGTGCTGCTGCCTCAAAGAAAGATCTAGAACATGACAAGTCTCTCAAAATAATGCACCAGCCTTCACTGCTTAATTTCTGTGTCACTCCCACAACAACAGCTCCTACTACTACCACTCTTGTACCTCCCATCACTACCTCCTCTACTACTGTTCCATCCCTCGTCATTGCTCAAGTTCAAGGCATAGGAGATCCAGCTGCTGCGGCGAGATCAACGGTGTTCATTAACGATGTGGCATTTGAGGTAGCAGTGGGACCTTTCAACGTGCGTGAGGCCTTTGGAGATGATGCTGTGCTCATCCATGCTACTGGTCAACCTGTTCTAACAAACCAATGGGGTGTCACTCTTCAATCACTCCAGCATGGCGCATATATAGGAAGTAGAAAGCTGAATGATGAATGGGAGGTTTTAGATATGGAAGATAAGAAATATTTGTGCGTCTGCGGAAGGCCCATGCCTCCTTTTGCTGTTCAATAA 1263 0.4798 MASSNRHWPSMFKSKPCNPHHQWQHDINSSLISTGCHRSPYTSGGGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLQNSKNLETQQNPTSLPQITAPSSSSSSSEKSSPKEIIPTKVFSIGFSNVTDVVPNSPTTSVNQTYFQTHNGSLLPPPPPPSAAPTEAFFFPVQHNGQGVAPSTVTSQGFCFSELSNVVHAQSHAQHHVGPCTSLLLSEIVSHGAAASKKDLEHDKSLKIMHQPSLLNFCVTPTTTAPTTTTLVPPITTSSTTVPSLVIAQVQGIGDPAAAARSTVFINDVAFEVAVGPFNVREAFGDDAVLIHATGQPVLTNQWGVTLQSLQHGAYIGSRKLNDEWEVLDMEDKKYLCVCGRPMPPFAVQ 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16408g00001 420 MobiDBLite consensus disorder prediction 38 61 - -
Mupr16408g00001 420 FunFam WUSCHEL-related homeobox 11 55 122 - -
Mupr16408g00001 420 SMART HOX_1 53 120 IPR001356 GO:0003677
Mupr16408g00001 420 CDD homeodomain 54 116 IPR001356 GO:0003677
Mupr16408g00001 420 Gene3D - 55 121 - -
Mupr16408g00001 420 MobiDBLite consensus disorder prediction 115 154 - -
Mupr16408g00001 420 ProSiteProfiles 'Homeobox' domain profile. 51 116 IPR001356 GO:0003677
Mupr16408g00001 420 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 386 IPR044557 GO:0003700|GO:0050793
Mupr16408g00001 420 MobiDBLite consensus disorder prediction 123 154 - -
Mupr16408g00001 420 Pfam Homeodomain 55 115 IPR001356 GO:0003677
Mupr16408g00001 420 SUPERFAMILY Homeodomain-like 51 119 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16408g00001 Mupr-Chr16408 4703 7223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16408g00001 1 385 Wox Gene Family AT5G45980 39.691 9.62e-74 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mupr16408g00001 Homeodomain 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16408g00001 - - pvu:PHAVU_006G179900g 642.884