Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16406g00002 ATGATTCCAGGGAAAGACCCGTTGCCATGGTCTAGCCGAGTGCAAATTGCGCTAGATTCAGCAAGAGGCCTTGAATATATCCACGAGCACACTGTGCCTGTGTACATCCATCGTGATGTTGCAGATTTTGGCTTGACCAAACTTATTGAAGTTGGAGGCTCCACACTTCACACTCGTCTTGTGGGAACATTTGGATACATGCCACCAGAATATGCTCAATATGGTGACGTTTCTCCAAAAGTAGATGTATATGCTTTTGGAGTTGTTCTTTATGAGCTAATTTCTGCAAAGAATGCTATTCTGAAGACAGGTGAATCTGTTGCTGAATCAAGAAAGGGCCTTGTAGCTTTGTTTGAAGAAGCACTTAATCAGAGTAATCCTTTAGAGGGTATTCGCAAACTGGTGGATCCTAGGCTTGGAGAAAACTACCCCATTGATTCAGTTCTGAAGATTGCCCAACTGGGAAGAGCTTGTACAAGAGATAATGCACTACTACGCCCAAGTATGAGGTCTATAGTTGTTGCTCTTATGACACTTTCATCACCTACTGAGGATTGCGAAGATGAAACTTACTACGAAAATCAAACTCTCATAAATCTACTGTCTGTGAGATGA 615 0.4228 MIPGKDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVADFGLTKLIEVGGSTLHTRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKNAILKTGESVAESRKGLVALFEEALNQSNPLEGIRKLVDPRLGENYPIDSVLKIAQLGRACTRDNALLRPSMRSIVVALMTLSSPTEDCEDETYYENQTLINLLSVR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16406g00002 204 Pfam Protein kinase domain 17 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16406g00002 204 Gene3D Transferase(Phosphotransferase) domain 1 3 200 - -
Mupr16406g00002 204 ProSiteProfiles Protein kinase domain profile. 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16406g00002 204 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 3 186 IPR044812 GO:0019199|GO:0045087
Mupr16406g00002 204 SUPERFAMILY Protein kinase-like (PK-like) 5 182 IPR011009 -
Mupr16406g00002 204 FunFam PTI1-like tyrosine-protein kinase 3 2 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16406g00002 Mupr-Chr16406 11447 12911 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16406g00002 4 204 Receptor kinase-like Gene Family AT3G21630 60.185 2.11e-80 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mupr16406g00002 Pkinase 5.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16406g00002 - K13429 gmx:100776847 360.533