Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16406g00001 ATGTATACGCATCCAAACTATATAACATTCAAAGCCATTCTCAACATGCTCAACGGCATCCATTTAACTTGCGGATTCAACAAGCCCAGGTTCTTGATTTTGTGTTCCTCTAGAATAGGCTTCACAAACTTACTACTCTACCACCCAATGGAACACAGATTGAGATTATCAATTTTCTTCTTGTTATGGGCCTCTATATCATTTAGTGCAGAATCCAAGTGTAGCAAGGGTTGTACTTTAGCTCTAGCTTCCTACTATCTATCAGGAAGTGACTTGACACATATATCAGAGCTTATGAAATCCCAGGTTCTTTCAAAAGCTGAAGATATTCTTGGCTACAACACTGACACCATAAAAAACAAAGACCAGATCCCAGTATCTACCAGAGTGAACGTTCCATTCCCTTGTGATTGCATTGAGGAAGAGTTTCTTGGCCATATATTCCAATACAACCTTGTATCAGGAGACACTTATTTGTCCATTGCCAATCAGAAGTACTCCAATTTGACCACTGCTGACTGGTTGCAGAGATTTAACCAATATTCACCAACAAGTATTCCTGATAGTGGGACTCTTAATGTTACCATTAACTGCTCCTGTGGGAACAGTGATGTTTCCAAGGAATATGGATTGTTCATCACATACCCTCTTAGACCTGAGGATTCTTTGCAGTCAATTGCCAACAAGACTGGGGTTGAGAGTGACTTGCTGCTTAAGTACAACCCGGGTGTAAATTTTAGCCAAGGGAGTGGTCTGGTTTATATTCCAGGAAAAGGTACATGCTTACTTTGCTACCATGCTTTGATCAAAATGGTATCTATGTGCCCTTTCAAGCAAGATATTCATATCAGAAAAGGTAAACATATCCGAGAAGTACAATGTAAACCTATTGTTTCAACAGATGCAGGTCTTTCGGGTGGGATTATCGTTGGAATATCTGTTGGAGTAGTAATAGGACTTCTGCTATTGGTATTTTGTGTGTATGTTACATATTACCGAAGAAAATGGAAGAAGAAATTGCTTTCAGAAGAATCCAGAATGAACTCTGCTAGAGTTAAAAATGATGAAGCCTTTGGTGGTCCTGTTGCAGCAGGTGATACTAACACCATTGGCATTAAGGTGGAGAAATCAGCAGAGTTTTCATATGAAGACCTAGCCAATGCCACAAATAACTTCAATTTGGCAAATAAAATTGGTCAAGGTGGTTTTGGGGAAGTCTATTATGCAGAGCTGAATGGCGAGAAAGCTGCAATAAAAAAGATGGAGATGAAAGCATCAAGAGAATTTTTTGCTGAACTGCAAGTGTTGACACGTGTTCATCACTTGAACCTGGTGCGCTTGATTGGATATTGTGTTAAGGACTCCCTTTTCCTTGTCTATGAATTCATTGAGAATGGCAACTTAGGACAACATCTCCGTAAATCAGGTTTTGATCCTTTGCCATGGTCTACCCGAGTTCAAATTGCTCTGGATTCAGCCAGAGGTCTTCAATACATTCATGAGCATACTGTGCCTGTATATATCCATCGTGACATAAAGCCAGAAAATATTTTATTAGACAAAAACTTCTGTGCAAAGGTTGCAGACTTTGGATTAACCAAGTTGATTGATTTTGGAAGTTCATCACTTCCCACTTCTAATATGAAGGGCACATTTGGTTACATGCCACCAGAATATGCATATGGCAATGTTTCTCCCAAAATAGATGTCTATGCTTTTGGAGTTGTTCTCTATGAACTAATTTCTGCTAAAAAAGCATTGATCAAGGGTGGTGTATCTGGTGCCGAATTAAAGGGCCTTGTATCTTTGTTTGATGAAGTTTTTGATGAGCAAGATCCCACAGAAGGCCTTATAAAGCTGGTGGATCCCAGGCTTGGAGATAACTACCCAATTGATTCAGTTCTCAAGATGGCACAACTTGCAAAAGCATGCACAGAGACCGATCCACAAGAACGTCCAAATATGAGTTCTGTTGTGTATGTTTGTTGCAATGTGGAATCCAAGTGTGTGAAGGGGTGTGATGTAGCTTTAGCTTCTTACTATGTCAATCCAGGGTATTTACTCGTAGAAAACATAACGCGCTTGATGAAATCAAGCGTTCTGTCCAATTCAGACGCTATAATCAGCTACAATGAAGACAAAATATTCAATAATAATGTGCTATCCTTTTACAGACTCAATGTTCCATTCCCCTGTGGCTGTATTGATGGTGAGTTTCTGGGACATGTGTTTGAGTACTCAGCTGCTGCAGGTGACACCTATGATTCCATTGCCAAAGTGACATATGCGGATCTCACCACTGTTGAGCTTTTGCGGAGGTTCAACAGTTATGACCATGATATACCAGCAAATGCCAAGGTTAATGTCACAGTCAACTGTTCTTGTGGGAACAGCCAGGTTTCAAAAGATTATGGGCTGTTTATTACCTATCCACTTAGGCCTGGGAATGATTTGCATGATATGGCCAATGAGACTCATCTTGATGCACAGTTGCTGCAGAATTACAATCCGGGTGTCAATTTCAGCAAAGAGAGTGGAATTGTTTTCATTCCAGGAAGAGGTCTAGCTACGGGTGCTACTGTTGGACTATCTATAGCAGGAATATGCGGGCTTCTGTTACTAGTAATTTGCATATATGCCAAATACTTCCGGAATAAGGAAGGAGAGAAAGCTAAATTGCCAACAGAAAATTCTTTGGGGTTTTCAACTCAAGATGCCTCTGGAAGTTCAGAATATGCAAGTTCAGGATCCAGTGGGCCTGCTGCTGGCCTTACAAGCATTATGGTGGCAAAATCAATGGAGTTCTCATATCAAGAACTAGCCAAGGCTACAAATAACTTCAGCTTAGAGAATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGAACTGAGAGGCGAGAAAACAGCAATTAAGAAGATGGACGTACAAGCATCGACAGAATTTCTTTGTGAGTTGAAGGTCTTAACACACGTTCATCACTTGAATCTGGTACAACATCCTTCAAACAACTTCAAGCATGTGCGCTTGATTGGATATTGCGTTGAGGGATCTCTTTTCCTTGTATATGAATATATTGACAATGGAAACTTAGGCCAATATTTGCATGGTACAGGTGAGATCAGCGTACATTGA 3141 0.4027 MYTHPNYITFKAILNMLNGIHLTCGFNKPRFLILCSSRIGFTNLLLYHPMEHRLRLSIFFLLWASISFSAESKCSKGCTLALASYYLSGSDLTHISELMKSQVLSKAEDILGYNTDTIKNKDQIPVSTRVNVPFPCDCIEEEFLGHIFQYNLVSGDTYLSIANQKYSNLTTADWLQRFNQYSPTSIPDSGTLNVTINCSCGNSDVSKEYGLFITYPLRPEDSLQSIANKTGVESDLLLKYNPGVNFSQGSGLVYIPGKGTCLLCYHALIKMVSMCPFKQDIHIRKGKHIREVQCKPIVSTDAGLSGGIIVGISVGVVIGLLLLVFCVYVTYYRRKWKKKLLSEESRMNSARVKNDEAFGGPVAAGDTNTIGIKVEKSAEFSYEDLANATNNFNLANKIGQGGFGEVYYAELNGEKAAIKKMEMKASREFFAELQVLTRVHHLNLVRLIGYCVKDSLFLVYEFIENGNLGQHLRKSGFDPLPWSTRVQIALDSARGLQYIHEHTVPVYIHRDIKPENILLDKNFCAKVADFGLTKLIDFGSSSLPTSNMKGTFGYMPPEYAYGNVSPKIDVYAFGVVLYELISAKKALIKGGVSGAELKGLVSLFDEVFDEQDPTEGLIKLVDPRLGDNYPIDSVLKMAQLAKACTETDPQERPNMSSVVYVCCNVESKCVKGCDVALASYYVNPGYLLVENITRLMKSSVLSNSDAIISYNEDKIFNNNVLSFYRLNVPFPCGCIDGEFLGHVFEYSAAAGDTYDSIAKVTYADLTTVELLRRFNSYDHDIPANAKVNVTVNCSCGNSQVSKDYGLFITYPLRPGNDLHDMANETHLDAQLLQNYNPGVNFSKESGIVFIPGRGLATGATVGLSIAGICGLLLLVICIYAKYFRNKEGEKAKLPTENSLGFSTQDASGSSEYASSGSSGPAAGLTSIMVAKSMEFSYQELAKATNNFSLENKIGQGGFGAVYYAELRGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVQHPSNNFKHVRLIGYCVEGSLFLVYEYIDNGNLGQYLHGTGEISVH 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16406g00001 1046 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 56 660 IPR044812 GO:0019199|GO:0045087
Mupr16406g00001 1046 Pfam Protein tyrosine and serine/threonine kinase 948 1039 IPR001245 GO:0004672|GO:0006468
Mupr16406g00001 1046 Pfam Protein tyrosine and serine/threonine kinase 393 659 IPR001245 GO:0004672|GO:0006468
Mupr16406g00001 1046 SUPERFAMILY Protein kinase-like (PK-like) 375 660 IPR011009 -
Mupr16406g00001 1046 Gene3D Phosphorylase Kinase; domain 1 364 462 - -
Mupr16406g00001 1046 FunFam PTI1-like tyrosine-protein kinase 3 463 672 - -
Mupr16406g00001 1046 Gene3D Phosphorylase Kinase; domain 1 927 1027 - -
Mupr16406g00001 1046 CDD STKc_IRAK 398 659 - -
Mupr16406g00001 1046 SUPERFAMILY Protein kinase-like (PK-like) 927 1042 IPR011009 -
Mupr16406g00001 1046 ProSitePatterns Protein kinases ATP-binding region signature. 953 975 IPR017441 GO:0005524
Mupr16406g00001 1046 Pfam LysM domain 218 246 IPR018392 -
Mupr16406g00001 1046 ProSitePatterns Protein kinases ATP-binding region signature. 398 420 IPR017441 GO:0005524
Mupr16406g00001 1046 ProSiteProfiles LysM domain profile. 213 262 IPR018392 -
Mupr16406g00001 1046 FunFam LysM receptor kinase 2 371 462 - -
Mupr16406g00001 1046 SMART serkin_6 392 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16406g00001 1046 Gene3D Transferase(Phosphotransferase) domain 1 463 675 - -
Mupr16406g00001 1046 ProSiteProfiles Protein kinase domain profile. 392 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16406g00001 1046 ProSiteProfiles Protein kinase domain profile. 947 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16406g00001 1046 ProSitePatterns Serine/Threonine protein kinases active-site signature. 507 519 IPR008271 GO:0004672|GO:0006468
Mupr16406g00001 1046 FunFam LysM receptor kinase 2 926 1027 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16406g00001 Mupr-Chr16406 2255 11392 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16406g00001 50 659 Receptor kinase-like Gene Family AT3G21630 53.698 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mupr16406g00001 PK_Tyr_Ser-Thr 5.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16406g00001 - K13429 gmx:100803042 917.146