Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16399g00001 ATGGAATATGGTGGCTTGGTGCAGAATGGTGCATATGGGAGCTTGTCAGATTTTTTGGCCCCAGAAACGGATTTGATAGATGAGCTGCTGGTAGAAGGATGCTGGCTGGAAACAAGGGTGGGATGTGGATCGTACCTTAATTGTGGGACGGAGTCAAATGAGGCTCAAATAATTTTCCAAGAAGAGTCAGAGGCGGAAAGTTTGATGGTGGGGAAGAGATGGTGGATTGGACCAAGGGCGAATCCAGGGCCATCTTCGTCCGTGAAAGAGAGATTAGTGCTCGGCGTTGGGTACTTGAAAGAATACGCCAAGAATTCCAATGTGTTTATTCAGGTGTGGGTGCCCGCAGTGGCACGTAGAGGACTTGTGACCACTACACACCCATACTCCATCGACCTTGAGCTTGAGTATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGATAATAGTTATCAGTTTCAGGAAGATTGGGTTCACCAGTGGACTCCCAACATTCGCTTCTTCAGAAGTCACGACTACTCGCGCCTTCACCAATACGATATACGTGCTGGATCTCTCGCCCTTCCTGTCTTTGAGAGAGGCACTGCCATGTGTCTCGGTGTTGTTGAAATTTTCATGCCCAACAACCCCGACCCTGACCTTCACAATGTCTGCCATGCCCTTCAGGTAATTACTACCATTATGTCCTTCATTATTACTCTAGTTAATTCATTTCTAATTTTGCAATTCATGATTGATGAACAGGGTGGTGTTGATTTTAGGAGTTGTTCTCATCAGAACTTGATTCCACCAGCCGTGACAGTGAAGGGTTTGGAGGAGTTATACCAAGGTGCATTAAATGAGATAGTAGAAGTTTTGACGTGTGTGTGCAAGGCGCATAAGTTGCCTTTAGCTCTGACATGGGCTCCCTGCATCCAACAAGGAAAGAGTGGATGTGGGCATTCAAAGGATGAGAATTACGTGTCGACAGTGGATGGTGGTAGTTATGTGGCGGATGTAGAGGTATTGGGATTCCAGGAAGCGTGCTCTGAGTACCACCTTTTTGGGGGCCAAGGAGTGGTTGGGACAGCTTTCACAAGCACAAAACCTTGTTTTGCAAATGACATAAGGGGCTTCACCAAGGCTGAATATCCTCTGGCACACCACGCTAACATGTTCGGTTTGCATGCTGCCGTGGCCATTCCTCTCAAGAGTGTGTCAGGTGATTTTGTGTTGGAGTTTTTCCTGCCAAAGGATTGCCACGACAGCCAAGAGCAGAAGCAGATGCTCAACTCACTGTCTATGCTAGTACAGCAAGCTTGCCGGAGTTTGCATGTTGTCATGGAAAAGGAAGCTGAGGAGTTGGCGTTGCCAGTTGTTATGGAATCATCATCCTGGATTGCAGATATGATGGAGGCCCAAGCACAAGCACAGGCACAGGCACAGGCACAAACCCAACAACAACACCAACACCTACACAAAGGGAAAGGTGTCTCCGTTTCCTTGGAATACCTCCAAGAGCCAAAACAAGAGTTCAAAGTGACAACCAATTGCAACCAACAGGAACTAGGCAGTGTTAGCGTTGAGGGCGGGGGAGAAGAATCGTACGGTGGGCGACGGGGTGCCAGAAAATCAGGCGACAAGAGACGAACCAAGGCAGAGAAGACTATCAGCTTGCCTGTTCTGAGACAATACTTTGCAGGAAGCCTAAAAGACGCTGCCAAGAGCATTGGCGTATGTCCTACCACTCTAAAAAGGATATGCAGACAACATGGGATTACAAGGTGGCCTTCGAGGAAAATTAAGAAGGTAGGGCACTCTTTAAGGAAACTTCAACTTGTGATCGATTCCGTGCAGGGTGCCGAAGGTGCCATTCAAATTGGCTCCTTCTATAACAGTTTTCCGGAGTTGAGCTCTGCCAGTGGTGTTTCGGAATCATCCAAGATGAATAATGATAATAATATGTTTTATTCTGAAAATGGCTTGTATAACCAAGGACAAGGACAAGGACAAGGACAAGGTACTGGTTTCAAATCCCCAACGTCGTCTTGCAGTCAGACACAGACTTGTAATACAATGATCAACAATGCTGGTGATATTGTGATGTCAGAGAAGCAAGCAGTTGGTGCATCAATCCAAGTCCAAGGGGATGCACAACATTTCACCCACCAATACCATCATCCTATTCTTGAGGCTCAACCTCCCTTGCCCTTGCCCTTGCCCTTGCCCTTGCCCTTGCCCTTGTCCTTGCCCCAAACTAGTGCTAGTGTCTGGAACACGGCTACTTTTAGAGTCAAAGCTACTTTTGGGGATGAAAAAATCCGTTTTAGCTTGCAACAAAATTGGGGGTTCAGAGATTTGCAGATGGAGATTGCGAGACGCTTCAATCTAAACGAGATTAGCAACGTTCAGCTCAAGTATTTGGATGATGCTCGAGAATGGGTTCTTCTAACATGCGATGCTGATCTTGAGGAGTGTAAAGACATAAATAGATCATCTCAGACCCGCACAATTAGACTCTTCCTCTTTCAAGCTTCGCCTCTAAATCATGCAAATACACTTGGCCCCACCAGCCCCTCC 2580 0.4601 MEYGGLVQNGAYGSLSDFLAPETDLIDELLVEGCWLETRVGCGSYLNCGTESNEAQIIFQEESEAESLMVGKRWWIGPRANPGPSSSVKERLVLGVGYLKEYAKNSNVFIQVWVPAVARRGLVTTTHPYSIDLELEYNNNNNNNNNNNNNNNNNDNSYQFQEDWVHQWTPNIRFFRSHDYSRLHQYDIRAGSLALPVFERGTAMCLGVVEIFMPNNPDPDLHNVCHALQVITTIMSFIITLVNSFLILQFMIDEQGGVDFRSCSHQNLIPPAVTVKGLEELYQGALNEIVEVLTCVCKAHKLPLALTWAPCIQQGKSGCGHSKDENYVSTVDGGSYVADVEVLGFQEACSEYHLFGGQGVVGTAFTSTKPCFANDIRGFTKAEYPLAHHANMFGLHAAVAIPLKSVSGDFVLEFFLPKDCHDSQEQKQMLNSLSMLVQQACRSLHVVMEKEAEELALPVVMESSSWIADMMEAQAQAQAQAQAQTQQQHQHLHKGKGVSVSLEYLQEPKQEFKVTTNCNQQELGSVSVEGGGEESYGGRRGARKSGDKRRTKAEKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKVGHSLRKLQLVIDSVQGAEGAIQIGSFYNSFPELSSASGVSESSKMNNDNNMFYSENGLYNQGQGQGQGQGTGFKSPTSSCSQTQTCNTMINNAGDIVMSEKQAVGASIQVQGDAQHFTHQYHHPILEAQPPLPLPLPLPLPLPLSLPQTSASVWNTATFRVKATFGDEKIRFSLQQNWGFRDLQMEIARRFNLNEISNVQLKYLDDAREWVLLTCDADLEECKDINRSSQTRTIRLFLFQASPLNHANTLGPTSPS 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16399g00001 860 Coils Coil 467 487 - -
Mupr16399g00001 860 ProSiteProfiles PB1 domain profile. 762 845 IPR000270 GO:0005515
Mupr16399g00001 860 PANTHER PROTEIN NLP8 68 845 IPR045012 GO:0003700
Mupr16399g00001 860 ProSiteProfiles RWP-RK domain profile. 543 624 IPR003035 -
Mupr16399g00001 860 CDD PB1_NLP 763 844 IPR034891 -
Mupr16399g00001 860 MobiDBLite consensus disorder prediction 523 553 - -
Mupr16399g00001 860 MobiDBLite consensus disorder prediction 536 553 - -
Mupr16399g00001 860 Pfam PB1 domain 762 844 IPR000270 GO:0005515
Mupr16399g00001 860 SMART PB1_new 762 845 IPR000270 GO:0005515
Mupr16399g00001 860 Pfam RWP-RK domain 557 604 IPR003035 -
Mupr16399g00001 860 SUPERFAMILY CAD & PB1 domains 759 847 - -
Mupr16399g00001 860 Gene3D - 763 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16399g00001 Mupr-Chr16399 13783 16564 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16399g00001 52 855 NLP Transcription Factor Family AT4G35270 40.687 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mupr16399g00001 PB1 2.8e-16 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16399g00001 - - pvu:PHAVU_009G115800g 1110.13