Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16391g00005 ATGTTTGGACTTCCAGAGACAGATAGATTAGATGACATAACAAAGGTCATAGCAGAAGGAGAACCATCTTCTCAAATGGGAAGGAAGCATTTCTATGGTCCAACTCCTGGAACAACCTTAAACACAGTAACCCCTTGTGCTGCATGCAAGCTTTTAAGAAGAAGGTGTGCTGAAGAATGTCCTTTCTCTCCTTACTTTTCACCACATGAGCCTCAAAAGTTTGCAGCCGTTCACAAAGTGTTTGGTGCAAGCAATGTCTCCAAGATGCTAATGGAGGTACCAGAGGGGCAAAGAGCTGATGCAGCAAATAGCTTGGTTTATGAAGCTAACTTGAGGCTAAGAGATCCTGTGTATGGATGCATGGGTGCAATTTCAGCTTTGCAGCAACAAGTTCAATCTTTACAAGCAGAACTAAATGCAATAAGGGCAGAGATACTAAAATACAAATATAGAGAAGCTGCAAGTCTCATTTCTTCTCATCATGCTGCTTTAGTTTCTTCTGCTGACCATGCAGTGTCAGTAGCAATTCCTGCAGATCACTCACAAGGTCTTTCTCAACCTCCTCCTCTTCTTCTTCCAAAACCATTACCTTCTCCTTCACCAAAACCATTACCTTCTCCTTCTGTTATCCTTTCTTCCTTGTCTTCATCCTCAGCTTCTTCTGTGTACACTCCTCCTAAAAGCTCAATGAGCCTTGGATCCATTTCCAGCACTGAAAATGTCCCATACTTTGTTTAG 738 0.4228 MFGLPETDRLDDITKVIAEGEPSSQMGRKHFYGPTPGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPEGQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQSLQAELNAIRAEILKYKYREAASLISSHHAALVSSADHAVSVAIPADHSQGLSQPPPLLLPKPLPSPSPKPLPSPSVILSSLSSSSASSVYTPPKSSMSLGSISSTENVPYFV 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16391g00005 245 ProSiteProfiles LOB domain profile. 44 145 IPR004883 -
Mupr16391g00005 245 MobiDBLite consensus disorder prediction 207 245 - -
Mupr16391g00005 245 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 41 197 - -
Mupr16391g00005 245 Coils Coil 124 151 - -
Mupr16391g00005 245 Pfam Lateral organ boundaries (LOB) domain 45 141 IPR004883 -
Mupr16391g00005 245 MobiDBLite consensus disorder prediction 184 245 - -
Mupr16391g00005 245 MobiDBLite consensus disorder prediction 188 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16391g00005 Mupr-Chr16391 37444 38501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16391g00005 26 158 AS2 family AT2G30340 79.851 1.23e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr16391g00005 LOB 8.5e-41 No_clan