Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16386g00001 ATGTCTGTTGATGATGCTAAGTGTTCCGTGATGAAAGCGGTTAAACTTGGTGCATGTGATTATTGGCTTAAGCCTTTGCATGAGGGTCAATTCAGGAATATGTGGACGCATGCCGTTAGGAAAGCTTTGAATGATAATAAGAAACAAGAAAATTCGAGCAGATTGGAAGGTGACGATAGAAAAAAACGGGGGAATGATAATTCTGAAAATGCTTCTTCTGTTATTGATGCAACAGGAGTCGTTAGAGACAGTTCCAGAGGAGGTGATGATGGTGATGAATCGGAGCATAGTGGTCCCCCAAGAAAAAAGGACCGTATAGTATGGACACCCGAACGGCACCGTCTATTTGTCAAGGCTGTGAATCAAATTGGACTTGATAAGGCTGTGCCTAAGAGAATTCTTGAAGTGATGGATATGCCTGATTTGACGAGAGATCATGTCGCCAGTCACCTGCAGAAGTATAGACATTTTCTGAAGAATAATCCCGACGGAGTGATACAGAAACGGAAGACATTGCAAAAGACTGTCCCAGGAATTATAGAGTCCAGACTTGGTGCATGTGGAGGATCTAACTCTCAAGCTTTGGTAGGTACATGTGGAGGATCTAACTCTCAAGCATTGGTAGGTACATGTGGAGGATCTAACTCTGAAGCTTTGCCTGTTCCGAGCAATGTTCCCTATTTAATACCTGCAACCTATCATCCTGGTCTCCCAACTATACGAGGTGATGTTTCTAGATATTATGGAGTATGGTCTCCATCCAATACAGTGGCTATTGAAAATCAGGGTATTCAGATGCCAATGGATACACTGCAGCAGCAAAGGCAACGGCCACTGATGTTTAATCAAACTCATTCAATCAACTATTACCCACCATCTCCCATGATGATTTCTGAAAATTCAGCTTCACTCACCCCGAATTTCAGCTTTGGTAGTGATACTGATCATCATTTACTACCACCTCATGCTATTAATTCAGAGGATGTTTTTCAAATTCATCAGGAAAACAACAATGGATGTACTACTCCAGCTTCTGTTTTTCAACAGTTTCAAATAAGTGATGCTGTGCCCGTGGGATTTTGCCCTGCATCAGTGCCTGATACTACACTTGTTCATTATGGTTCTAGATTTGGTGATTCTATATCCACAGTCTCCCCTGTGAGTCTTGGAGATGGTGAAGAAAATATTGATAATAACACACCAAAGGAGGGGTCAAATTCAATGAATAGTCCACCAGAAGATCACACCGTCTTATAA 1257 0.4185 MSVDDAKCSVMKAVKLGACDYWLKPLHEGQFRNMWTHAVRKALNDNKKQENSSRLEGDDRKKRGNDNSENASSVIDATGVVRDSSRGGDDGDESEHSGPPRKKDRIVWTPERHRLFVKAVNQIGLDKAVPKRILEVMDMPDLTRDHVASHLQKYRHFLKNNPDGVIQKRKTLQKTVPGIIESRLGACGGSNSQALVGTCGGSNSQALVGTCGGSNSEALPVPSNVPYLIPATYHPGLPTIRGDVSRYYGVWSPSNTVAIENQGIQMPMDTLQQQRQRPLMFNQTHSINYYPPSPMMISENSASLTPNFSFGSDTDHHLLPPHAINSEDVFQIHQENNNGCTTPASVFQQFQISDAVPVGFCPASVPDTTLVHYGSRFGDSISTVSPVSLGDGEENIDNNTPKEGSNSMNSPPEDHTVL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16386g00001 418 Pfam Myb-like DNA-binding domain 108 155 IPR001005 -
Mupr16386g00001 418 SUPERFAMILY Homeodomain-like 101 160 IPR009057 -
Mupr16386g00001 418 MobiDBLite consensus disorder prediction 383 418 - -
Mupr16386g00001 418 MobiDBLite consensus disorder prediction 43 107 - -
Mupr16386g00001 418 FunFam Two-component response regulator 99 161 - -
Mupr16386g00001 418 MobiDBLite consensus disorder prediction 83 107 - -
Mupr16386g00001 418 Gene3D - 100 160 - -
Mupr16386g00001 418 MobiDBLite consensus disorder prediction 43 67 - -
Mupr16386g00001 418 NCBIfam myb-like DNA-binding domain, SHAQKYF class 103 156 IPR006447 GO:0003677
Mupr16386g00001 418 ProSiteProfiles Response regulatory domain profile. 1 39 IPR001789 GO:0000160
Mupr16386g00001 418 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 159 IPR017930 -
Mupr16386g00001 418 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 52 339 IPR044841 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16386g00001 Mupr-Chr16386 1034 2754 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16386g00001 1 159 Response Regulator Gene Family AT3G16857 39.665 2.32e-32 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr16386g00001 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16386g00001 - K14491 gmx:102659569 252.677