Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16379g00002 ATGTCGCCGATTCCCGGAGCACGCGTCCCTCTCCTCCCGGGATCCGAGGGTGTTCCGCCGGCGACCGTGTCCGGCGCCGTGTTCAATGTTGCCACCAGCATAATCGGCGCCGGGATCATGTCTCTTCCGGCGACTCTGAAGGTGTTGGGCGTGATTCCGGCGTTGATGCTGATTCTGGTGATTGCGTTTTTGGCTGAACTATCGGTGGAGTTTCTGATGAGGTTCACACGTGCCGGCCAAACGACGACGTATGCCGGCGTCATGAGAGAGGCCTTTGGACCCTTGGGAGGAATAGCAGCTCAAGTCGCTGTCGTAATTACTAATCTAGGCTGTTTAATTATGTACCTAATTATTACTGCGGATGTGTTTTGTGGGAATCAAGTTGAAGGGGAAGTAAACTTGGGTATTTTACAACAGTGGTTTGGTGTTCACTGGTGGAATTCACGGGAATTTACTCTCTTCGTTGTTTTAGTCTTAATTTTGCTTCCATTGGTCTTGTACCGTCGCGTAGAGTCCTTGAAGTTCAGTTCTGCAATAGCAACTCTTCTTGCTTTGGCCTTTGTTGCAATATGTAGTGTGTTGGCAGTGGTTGCTATTGTAGAAGGAAAAACACAGTCGCCGAGATTGTTTCCTCGTTTGGATCACCACACCTCTTTCTTCGACCTGTTTACTGCAGTTCCAGTGATAGTCACAGCCTACACATTTCATTTTAATGTACACCCAATTGGGTTTGAGCTTGCAAAGCCATCTGAAATGGCAACAGCTGTTCGAATAGCATTACTGCTTTGTGCTGTCATTTACTTTTCAATAGGCCTATTTGGGTACCTCTTGTTTGGGGATTCAACACAGTCTGACATTCTGGTCAACTTTGACCAAAATGCTGGTTCTGCGATTGGTTCTTTGCTAAATGTTTTAGTCCGTTTAAGCTATGCTTTCCATGTTATGCTGGCTTTCCCAATTCTCAACTTTGCTCTGAGAACCAACATAGATGAATTCTTCTTCCCCAAGAAGCCTCTGCTAGCCACAGACAGCAAGAGATTTCTGGGCCTCACTCTAGTGCTACTAGCCTTTAGCTACATTGCTGCTATTGCAGTACCAGATATTTGGTACATCTTTCAGTTTATGGGATCAACATCTGCAGTGTGCCTTGCCTTTGTCTTCCCTGGTGCTATTGTTCTAAGGGATTCTTACGGTATATCAACAAGAAGGGACAAAATTATTGCACTCGTTATGGTCATGCTAGCTGTAATAACAAGACTTGTCAATATGGCTCCCAACAAGTTGAAAGCTGCTGATAAATTCGTTGATATTGGTGGCCATGAACACATCAAGCCGTGGTTTCATGTCAAGAGGGTGGGATCGTTGAACCCCAAATATCAGATCCTTCTCCTCCAAGCTTTTCCCTCTATGAACCATCCAACGATGCCGCAGTGTTACCAGATTAATCTTCAA 1452 0.4573 MSPIPGARVPLLPGSEGVPPATVSGAVFNVATSIIGAGIMSLPATLKVLGVIPALMLILVIAFLAELSVEFLMRFTRAGQTTTYAGVMREAFGPLGGIAAQVAVVITNLGCLIMYLIITADVFCGNQVEGEVNLGILQQWFGVHWWNSREFTLFVVLVLILLPLVLYRRVESLKFSSAIATLLALAFVAICSVLAVVAIVEGKTQSPRLFPRLDHHTSFFDLFTAVPVIVTAYTFHFNVHPIGFELAKPSEMATAVRIALLLCAVIYFSIGLFGYLLFGDSTQSDILVNFDQNAGSAIGSLLNVLVRLSYAFHVMLAFPILNFALRTNIDEFFFPKKPLLATDSKRFLGLTLVLLAFSYIAAIAVPDIWYIFQFMGSTSAVCLAFVFPGAIVLRDSYGISTRRDKIIALVMVMLAVITRLVNMAPNKLKAADKFVDIGGHEHIKPWFHVKRVGSLNPKYQILLLQAFPSMNHPTMPQCYQINLQ 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16379g00002 484 PANTHER AMINO ACID TRANSPORTER 19 416 - -
Mupr16379g00002 484 Pfam Transmembrane amino acid transporter protein 21 403 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16379g00002 Mupr-Chr16379 5744 12157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16379g00002 5 426 Amino Acid or Auxin Permease AAAP Family AT3G56200 57.981 2.29e-173 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16379g00002 - - gmx:100800330 733.406