Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1635g00004 ATGGGCAACTGCAGCAGCAGCGGCGGCGGCGGCGGAGGCGCCACCACTTACTCGGACGATGTTCCCCGGCACAACGGCATCACAGTCCTCCCTCCTAATACTGCACCCTCACCCCCTCCCCCAGCGATACCCTCATCGTTGGGCCGGGTGCTGGGCAGGCCCATGGAGGACGTGCGGTCCGTTTACATCTTCGGGCGCGAGCTGGGCCGGGGCCAGTTCGGCGTGACGTACTTGGTGACCCACAAGGCGACGAAGGAGCAGTTCGCGTGCAAGTCAATCGCGACTCGCAAGCTCGTGAACCGCGACGACATCGATGACATTCGCCGCGAGGTTCAGATCATGCACCACCTCACCGGCCACCGCAACATCGTGGAGCTCAAAGGCGCCTACGAGGACCGCCACTCCGTCAACCTCATCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGACCGGATCATCACCAAGGGCCACTACTCCGAGCGCGCCGCCGCCAACTCCTGCCGCCAGATCGTGACCGTCGTCCACAACTGCCACTCCATGGGCGTCATGCACAGGGACTTGAAGCCTGAGAATTTCTTGTTGCTCAGCAACCACGATGATTCTCCTCTCAAGGCCACAGATTTTGGTCTCTCCGTCTTTTTTAAGCCAGTGTTTATTTTTGAAAAATTTATCAACGGAATGTTTTATTGGGGGGTTGTTGCATTGGTTGACTTTGGGAGTTGGGTTTTGGGAACAGGGGATGTGTTTAAAGACCTAGTTGGGAGTGCCTACTATGTTGCTCCTGAGGTGCTGAAAAGAAGTTATGGGCCTGAGGCTGATATTTGGAGTGCCGGCGTTATATTGTATATTCTGCTTTCTGGTGTTCCACCTTTCTGGGCAGAAAATGAACAGGGTATCTTTGATGCTATTCTTCGGGGACATATTGATTTTGCATCGGATCCTTGGCCTTCCATATCAAGTAGTGCCAAAGATCTGGTCAAGAAGATGCTACGAGCCGACCCTAAAGAACGGCTTTCAGCAGTTGAAGTGCTTAATCATCCCTGGATGAGAGTAGATGGAGATGCATCTGATAAGCCTCTTGATATTGCTGTTTTAACCAGAATGAAACAATTCCGGGCAATGAACAAGCTAAAAAAAGTAGCACTGAAGGTTATTGCTGAAAGCCTTTCTGAAGAAGAAATTATTGGCTTGAAGGAGATGTTCAAATCTATGGATACAGATAACAGTGGAACAATCACATTTGAAGAGTTGAAAGCTGGTCTCCCAAAACTGGGTACTAAACTTTCTGAGTCTGAAGTAAGGCAGTTGATGGAAGCGGCTGATGTAGATGGAAATGGAACCATTGATTACATTGAATTTATAACTGCTACCATGCACATGAATAGAATGGAAAGAGAAGATCACCTATATAAAGCCTTCGAATATTTTGACAATGATAAGAGCGGGTACATTACAATGGAAGAGTTGGAATCTGCCCTTAAGAAGTATAATATGGGTGATGAGAAAACAATAAAGGAGATCATTGCCGAAGTTGATACAGACAATGATGGAAGAATTAACTATGATGAGTTTGTAGCCATGATGAGGAAAGGCAACCCAGACATAACCAACATAACCCACAGACGTCGCAAATAA 1635 0.4893 MGNCSSSGGGGGGATTYSDDVPRHNGITVLPPNTAPSPPPPAIPSSLGRVLGRPMEDVRSVYIFGRELGRGQFGVTYLVTHKATKEQFACKSIATRKLVNRDDIDDIRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMELCAGGELFDRIITKGHYSERAAANSCRQIVTVVHNCHSMGVMHRDLKPENFLLLSNHDDSPLKATDFGLSVFFKPVFIFEKFINGMFYWGVVALVDFGSWVLGTGDVFKDLVGSAYYVAPEVLKRSYGPEADIWSAGVILYILLSGVPPFWAENEQGIFDAILRGHIDFASDPWPSISSSAKDLVKKMLRADPKERLSAVEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAESLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDNDKSGYITMEELESALKKYNMGDEKTIKEIIAEVDTDNDGRINYDEFVAMMRKGNPDITNITHRRRK 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1635g00004 544 Gene3D Phosphorylase Kinase; domain 1 64 147 - -
Mupr1635g00004 544 FunFam Calcium-dependent protein kinase 1 357 532 - -
Mupr1635g00004 544 MobiDBLite consensus disorder prediction 1 48 - -
Mupr1635g00004 544 PANTHER SERINE/THREONINE-PROTEIN KINASE 64 524 - -
Mupr1635g00004 544 ProSiteProfiles EF-hand calcium-binding domain profile. 428 463 IPR002048 GO:0005509
Mupr1635g00004 544 ProSitePatterns EF-hand calcium-binding domain. 512 524 IPR018247 -
Mupr1635g00004 544 Pfam EF-hand domain pair 397 457 IPR002048 GO:0005509
Mupr1635g00004 544 Pfam EF-hand domain pair 467 529 IPR002048 GO:0005509
Mupr1635g00004 544 ProSitePatterns EF-hand calcium-binding domain. 441 453 IPR018247 -
Mupr1635g00004 544 FunFam Calcium-dependent protein kinase 1 64 147 - -
Mupr1635g00004 544 ProSitePatterns Protein kinases ATP-binding region signature. 68 91 IPR017441 GO:0005524
Mupr1635g00004 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Mupr1635g00004 544 ProSiteProfiles EF-hand calcium-binding domain profile. 392 427 IPR002048 GO:0005509
Mupr1635g00004 544 ProSiteProfiles Protein kinase domain profile. 62 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1635g00004 544 ProSiteProfiles EF-hand calcium-binding domain profile. 499 534 IPR002048 GO:0005509
Mupr1635g00004 544 ProSitePatterns EF-hand calcium-binding domain. 405 417 IPR018247 -
Mupr1635g00004 544 Gene3D - 357 532 - -
Mupr1635g00004 544 FunFam Calcium-dependent protein kinase 5 148 357 - -
Mupr1635g00004 544 CDD STKc_CAMK 61 348 - -
Mupr1635g00004 544 ProSiteProfiles EF-hand calcium-binding domain profile. 464 498 IPR002048 GO:0005509
Mupr1635g00004 544 SMART efh_1 432 460 IPR002048 GO:0005509
Mupr1635g00004 544 SMART efh_1 468 496 IPR002048 GO:0005509
Mupr1635g00004 544 SMART efh_1 503 531 IPR002048 GO:0005509
Mupr1635g00004 544 SMART efh_1 396 424 IPR002048 GO:0005509
Mupr1635g00004 544 Gene3D Transferase(Phosphotransferase) domain 1 148 356 - -
Mupr1635g00004 544 SUPERFAMILY Protein kinase-like (PK-like) 62 350 IPR011009 -
Mupr1635g00004 544 Pfam Protein kinase domain 64 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1635g00004 544 SMART serkin_6 62 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1635g00004 544 SUPERFAMILY EF-hand 389 530 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1635g00004 Mupr-Chr1635 41551 46789 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1635g00004 48 543 EF-hand Containing Proteins AT4G23650 75.806 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mupr1635g00004 Pkinase 6.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1635g00004 K13412 - dcr:108208908 834.713