Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16349g00001 ATGGAGGGGAACTTCAGTTCATATAATCCTCAACTAGCCTCTAGTTTGAACAAGAGTTACAGGAAGCAGGAGCATGATGATCTCAAAGAAGAAGATTATATGTCTCCATCTTTCAATCTGAGGAACATTTCAAAGCTCATTCTTCCCCCACTGGGTGTTTCAAGCCAGAATCCAGTAAACTCAAAAGGATGGATCATATCACCAATGGATTCCAGATACAGGTGTTGGGAGAGTTTTATGGTTCTTCTGGTAGCTTATTCTGCATGGGTGTATCCCTTTGAAGTTGCTTTCATGCACAATTCTTCCAATAAAAAAATCTATATTGTGGACACTGTTGTTGATCTTTTCTTCGGTATTGATATTGTTTTGACATTCTTCGTGGCTTACATTGATCGAACAACTCATCTACTAGTTAGAGACAAGAAGAAGATTGTAGTGAGATACTTGTCTACATGGTTCGTGATGGATTTGGCATCAACTATACCGTATGAGGCACTTGGGTATTTGTTCACTGGAAAACACAAAGTGGGTCTTCCATACTCCCTGTTGGGCATGCTTAGATTTTGGAGAATTAGACGGGTTAAGCAATACTTCACAAGGCTTGAGAAAGATATCAGGTTCAGCTATTTTTGGATTCGATGTGCTAGGCTTCTTTGTGTAACACTTTTTTCAATCCATTGTGCTGGATGTCTCTATTACATGCTAGCTGATCGCTACCCACACCAAGGAAAGACATGGATTGGGGTTGTGATCCCAAACTTTCGAGAAACAAGCCTTCGTATCAGATACATTTCAGCCATGTACTGGTCCATCACTACCATGACCACTGTAGGTTATGGCGACCTCCATGCCGTGAACACCATGGAAATGATCTTCATTATTTTTTATATGCTCTTCAACCTTGGCCTAACTTCTTACTTAATTGGCAACATGACAAATCTTGTTGTTGAAGGAACTCGTCGTACCATGGAATTTAGAAATAGCATTGAAGCAGCATCAAACTTTGTGTGTCGAAATCGGTTGCCTCCAAGGTTAAAGGAGCATATCTTGGCTTACATGTGCCTAAGGTTTAAGGCAGAGAGCTTGAATCAACATCAGCTTATTGAGCAACTGCCAAAGTCAATTTGCAAAAGCATTTGCCATCATTTGTTTTTTGCAATTGTAGAGAAAGTCTATCTTTTCAAAGGCGTCTCAAAAGAAATTATTTTGTCCCTAGTTGCAAAAATGAAGGCAGAATATATACCACCTAGAGAGGATGTTATCATGCAAAATGAAGCACCAGATGATGTTTACATTATAGTGTCTGGAGAAGTGGAGATCATTGATAGTGTAATGGAGAAAGAGAAAATTTTAGGGACTTTACATACTGGGGACATGTTTGGAGAGGTTGGTGCACTTTGTTGTAGACCTCAGAGCTTTACTTACAGAACCAAGACTCTCACACAACTCCTAAGATTGAAAACCAATACTCTTGTAGAAGCAATGCAGATTAAAAAAGAAGACAACATACAAATACTTAAAAATTTTCTTCAGCATTTCAAGCAACTTAAGGATCTGAATATCAAAGATTTAATGGTGGAGAATGTGGAAGAAGAGGACCCTAACATGGATGTGAACTTGTTAATTGTGGCAAGCACAGGAAATGCTGCTTTTCTTGAGGAGCTTTTAAGAGCAGGTTTGGATCCTGACATTGGAGACTCCAAAGGAAAAACTCCATTGCACATAGCAGCATCAAATGGGCATGAAGAGTGTGTTAAAGTCTTACTCAAGCATGCATGCAACATACATATAAGAGACATAAATGGTAACACTGCATTATGGGATGCTATAGCATCAAAACACCACTCCATATTTCGAATTCTCTTCCAACTTACTGCTCTCTCTGATCCAAACATAGCAGGTGATCTCTTATGTACAGCAGCAAAAAGAAATGAATTAACAGTGATGAATGATCTTTTAAAACAAGGATTAAACATTGACTCTAAAGATCACCATGATACAAAAGCAATACAAATTGCCATGGCAGAAAATCATGTGGACATGGTTCAATTGCTTGTCATGAATGGTGCAGATGTCTCTGATGTACATAACCATGAATTTTCTTCATCCACCTTAAATGAAATGCTACAAAAGCGTGAAATTGGGCATCTAATTAATGTAAATGAGGTCATGCCCGATGAAGTTGTATTAAAGGGGCAACATCAAGAACAAGAGCACAAGGGAGGAAGATCTAATGTAGTAAAGTTTCCAAGAGTAAGCATATATCAAGGTCACCCAATAGTAAGAAGAGAAAAAAGTGTCTTGGAAGCTGGGAAGCTAATAAGGTTGCCTGATTCATTAGAGGAACTTAAATATATTGCAGGTGAAAAATTTGGGTTTGATGCAAAAGAAATAGTGGTGACAAATGAAGAAGGAGCAGAGATAGACTCTATTGATGTGATCAGAGATAATGATAAACTTTTTTTTTGTTGTTGA 2475 0.3826 MEGNFSSYNPQLASSLNKSYRKQEHDDLKEEDYMSPSFNLRNISKLILPPLGVSSQNPVNSKGWIISPMDSRYRCWESFMVLLVAYSAWVYPFEVAFMHNSSNKKIYIVDTVVDLFFGIDIVLTFFVAYIDRTTHLLVRDKKKIVVRYLSTWFVMDLASTIPYEALGYLFTGKHKVGLPYSLLGMLRFWRIRRVKQYFTRLEKDIRFSYFWIRCARLLCVTLFSIHCAGCLYYMLADRYPHQGKTWIGVVIPNFRETSLRIRYISAMYWSITTMTTVGYGDLHAVNTMEMIFIIFYMLFNLGLTSYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVCRNRLPPRLKEHILAYMCLRFKAESLNQHQLIEQLPKSICKSICHHLFFAIVEKVYLFKGVSKEIILSLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEIIDSVMEKEKILGTLHTGDMFGEVGALCCRPQSFTYRTKTLTQLLRLKTNTLVEAMQIKKEDNIQILKNFLQHFKQLKDLNIKDLMVENVEEEDPNMDVNLLIVASTGNAAFLEELLRAGLDPDIGDSKGKTPLHIAASNGHEECVKVLLKHACNIHIRDINGNTALWDAIASKHHSIFRILFQLTALSDPNIAGDLLCTAAKRNELTVMNDLLKQGLNIDSKDHHDTKAIQIAMAENHVDMVQLLVMNGADVSDVHNHEFSSSTLNEMLQKREIGHLINVNEVMPDEVVLKGQHQEQEHKGGRSNVVKFPRVSIYQGHPIVRREKSVLEAGKLIRLPDSLEELKYIAGEKFGFDAKEIVVTNEEGAEIDSIDVIRDNDKLFFCC 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16349g00001 824 FunFam Potassium channel KAT3 75 317 - -
Mupr16349g00001 824 SUPERFAMILY Ankyrin repeat 500 699 IPR036770 -
Mupr16349g00001 824 Gene3D - 537 718 IPR036770 -
Mupr16349g00001 824 Gene3D Jelly Rolls 361 536 IPR014710 -
Mupr16349g00001 824 ProSiteProfiles KHA domain profile. 751 824 IPR021789 -
Mupr16349g00001 824 Pfam Ion transport protein 74 322 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mupr16349g00001 824 ProSiteProfiles Ankyrin repeat profile. 665 697 IPR002110 GO:0005515
Mupr16349g00001 824 ProSiteProfiles cAMP/cGMP binding motif profile. 393 512 IPR000595 -
Mupr16349g00001 824 PANTHER POTASSIUM CHANNEL AKT1 40 822 IPR045319 GO:0005249|GO:0006813
Mupr16349g00001 824 ProSiteProfiles Ankyrin repeat region circular profile. 568 599 - -
Mupr16349g00001 824 ProSiteProfiles Ankyrin repeat profile. 568 600 IPR002110 GO:0005515
Mupr16349g00001 824 Pfam Ankyrin repeats (3 copies) 542 624 IPR002110 GO:0005515
Mupr16349g00001 824 Pfam Cyclic nucleotide-binding domain 413 496 IPR000595 -
Mupr16349g00001 824 Gene3D - 74 316 - -
Mupr16349g00001 824 Pfam KHA, dimerisation domain of potassium ion channel 750 822 IPR021789 -
Mupr16349g00001 824 PRINTS EAG/ELK/ERG potassium channel family signature 121 130 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr16349g00001 824 PRINTS EAG/ELK/ERG potassium channel family signature 110 120 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr16349g00001 824 PRINTS EAG/ELK/ERG potassium channel family signature 263 280 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr16349g00001 824 PRINTS EAG/ELK/ERG potassium channel family signature 289 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr16349g00001 824 PRINTS EAG/ELK/ERG potassium channel family signature 307 316 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mupr16349g00001 824 CDD CAP_ED 393 506 IPR000595 -
Mupr16349g00001 824 PRINTS Ankyrin repeat signature 681 695 IPR002110 GO:0005515
Mupr16349g00001 824 PRINTS Ankyrin repeat signature 569 584 IPR002110 GO:0005515
Mupr16349g00001 824 SMART ANK_2a 568 597 IPR002110 GO:0005515
Mupr16349g00001 824 SMART ANK_2a 665 694 IPR002110 GO:0005515
Mupr16349g00001 824 SMART ANK_2a 535 564 IPR002110 GO:0005515
Mupr16349g00001 824 SMART ANK_2a 601 632 IPR002110 GO:0005515
Mupr16349g00001 824 SUPERFAMILY Voltage-gated potassium channels 68 316 - -
Mupr16349g00001 824 SUPERFAMILY cAMP-binding domain-like 320 512 IPR018490 -
Mupr16349g00001 824 SMART cnmp_10 393 510 IPR000595 -
Mupr16349g00001 824 FunFam Potassium channel KAT2 381 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16349g00001 Mupr-Chr16349 3683 11356 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16349g00001 1 573 Ion Channels AT4G22200 70.812 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16349g00001 K21867 - gmx:100798422 1503.42