Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16324g00004 ATGTCAAATGTTTTGACTATGCTTGATAGCGAAACAGCAACCATGCCGTTGCCAATGCCAATTCTCACACAACCAACCTTTTTTGTGAACAAGGGTCTTTCTAGCTCAGCTTCTTCTTCTAGCAAACCAGGGATAACACTGCAATTTGAGAGCAGTCATCGAGAAGATATGAGAAGTGAGGTTCTGTTGTTCTTCTCCCTTGTTCTTTGTTGGGCGCTATGCTTCCAAGTGTGTTCCGGTGGAGATACTTTAAAAGCTAGGCAGAAGATAACTCCTCAGGACTCGGCGGGGAACCTTGTTTCATCTAACGCCACATTTGAGCTGGGCTTCTTTTCCAGTGATAGCAAGAGTGTTAAAAGATACTTGGGGATATGGTATCACGGCTTGCAACCACAAACAGTGGTATGGGTTGCCAATAGAAACGCCCCTGTTGTAGATTCTACTGCTGTTTTTCAAATTGCAGTGGATGGAAATCTGGTGGTACAAGATGCATCCAAAACCTATTGGTCCTCTGGACTTGAAGACCCCTCCTCGTCCACAAACACAACAGTACTGAAGCTACTAGATTCTGGGAACCTAGTACTAATGGGAAATAGTAGTTACCTGTGGCAGAGCTTCAAAAACCCAACAGACACGTTTCTTCCTGGCATGAAAATGGATGCAACTTTAATTTTGACTTCTTGGAGAGACGCCACTGACCCGGCAAGTGGGAACTTCACCTTCGAGCTGGCTCAGGAGGGTGAGAGTCCAAACTTCCTAGTACAAAACCAATCACAAATTTACTGGGAATTTGATGGCACATCAATTCCCCCATTAATATATGACTTGTTGGAGAACACTTCCTTGGTCAATTCATCGTACAATTTTTCACACAAAACACTCATTCCATCTCGGTCTTACAGTTATGGGAAATCAAGGCTATTAATGAAGTATAGCGGTGAGATACAATTTCTGAACTTGACTGAGAAGGAATGGCACGTGCAATGGTGGGGGCCAGCTGACAAGTGCTACATACATGAGTATTGCGGGCCCTTTGGCATCTGTAACCAAAATAATTTGATTCACTGCACATGTTTGCCAGGATTCAGTCCCATTTCCAGCGATGATGGACCATTCCAGTTCCACGGGTGCACCAGAAAATCAACATCGTGTATCGACACGGACGTCACGTTCCTCAACTTAACCAACATCAAACTTGACTCCCCAGACAAGGAAATGCCCGCAGAAACAGAAGCAGACTGCCAATCCTTATGCCTTAACATCTGTGCTGATTCCCCTTGTCAGGCATATTCATTTAATTCGTCACATAGTGATCCCGATTCCTATTCATGCAAGATCTGGACACGGAAATTACCCACTCTTCTAGAGGACTATGATCGCGGTCGTTTTCTTTCTATCCCGGTTAGGAGATCAGATATAGAAGCAACTGCAAAAACGTGTGAACCTTGCGGCACATATGCGATTCCTTATCCGCTAAGCACTGGGCCGAACTGTGGAGACCCCATGTACGACAAGTTCAATTGCAGCAAATCGACGGGCAATGTTCGCTTCTTGATGCCCGGTGGAATATCATACCCAGTTACTAGGATCAATGAAGATACTAGAATGTTTTACGTTGAAACATCTGGTTCATATTCATGTAGCTCCACATATCAATATGACACACCTAATTTTCCTTTTAATGTAATTGAGTGCCATCAAGACGATGAAATAGTTAAAATCAGTTGGCTACCAGCACCAGAACCGCCCTGTAGTAATCTTACACACTGCAATAATTGGCCCCACTCAACATGCAGAGCAACAAATGGATTTGGAAAACAAAGAAGGTGCCATTGCGATTCAAACTATTCTTGGAATAGCTCAACTATGAGTTGCACCCGAGAAGAGCCATCGAGCAACCATTCAACCAAGCGACTGGCATTGATTCTTACACTAGTTCTTGCAGGCATGGCTATTCTGTCCTGCATTATAGCATTTGCCATTGTGCGCAGGAAGAAAATATCCCACAACCTTGATCGCGCAAGCACCCAAATTCGGGAGAGTTTGTACGAGAGCGAAAGACATGTGAAAGGTTTGATTGGCTTAGCAAGTTTAGAAGAGAAAAATATTGAAGGCATTGAAGTACCCTTTTATACTTTCGCAAGCATTGTAGCAGCTACAAATAAATTCTCAGATTCTAACAAGCTTGGAAGAGGAGGTTATGGACCCGTGTATAAGGGAACGTTTCCTGGAGGTCAAGATATAGCTGTAAAGAGGCTTTCAAGTGCTTCCACTCAAGGCTTAGAGGAATTTAAGAATGAGGTTATTTTGATCGCAAAACTTCAACATCGGAACCTTGTTAGACTTAGGGGCTATTGCATTAAAGGAGATGAAAAAATCTTACTTTATGAATACATGCCAAACAAGAGTTTAGACTCATTTATATTTGACCGGACACGAACTTTACTCCTGGATTGGCCAATGCGGTTTGAGATAATTGTAGGCATTGCACGAGGCATGTTGTATCTTCACCAAGACTCCAGATTGAGAGTGATTCATAGAGACCTGAAAACCAGCAACATTCTACTAGATGAAGACATGAATCCAAAGATATCAGACTTTGGCCTTGCCAAAATGTTTGGGGGAAAAGAAACCGAAGCAACCACACAGAGAGTAGTGGGAACCTATGGATATATGGCTCCAGAGTATGCCTTGGACGGACTCTTTTCAATCAAATCCGATGTTTTCAGCTATGGAGTAGTTCTTCTAGAGATTCTTAGTGGAAAAAAGAACACGGGATTCTATCAGTCCAAGCAAATTTCTAGCCTTGTGGGTTATGCATGGAAGTTATGGACAGAGAATAAGCTATTGGATTTAATGGAACCATCTCTTGGTGAAACTTGCAACGAAAATGAATTCATTAGGTGTGCACTTATTGGGCTCTTATGCATACAAGATGAACCAGGTGATAGACCCACCATGTCAAATGTTTTGACAATGCTTGACAGCGAGACAGTAACCATGCCAATTCCCACGCAGCCAACCTTTTTTATAAACAAACATCTTTCTAGCTCAGCTTCCTCTTCTAGCAAACCAGAAATAAGTCTGCAATTTGAAAGCAGTTACCAAGAAGGTCGATAG 3120 0.4279 MSNVLTMLDSETATMPLPMPILTQPTFFVNKGLSSSASSSSKPGITLQFESSHREDMRSEVLLFFSLVLCWALCFQVCSGGDTLKARQKITPQDSAGNLVSSNATFELGFFSSDSKSVKRYLGIWYHGLQPQTVVWVANRNAPVVDSTAVFQIAVDGNLVVQDASKTYWSSGLEDPSSSTNTTVLKLLDSGNLVLMGNSSYLWQSFKNPTDTFLPGMKMDATLILTSWRDATDPASGNFTFELAQEGESPNFLVQNQSQIYWEFDGTSIPPLIYDLLENTSLVNSSYNFSHKTLIPSRSYSYGKSRLLMKYSGEIQFLNLTEKEWHVQWWGPADKCYIHEYCGPFGICNQNNLIHCTCLPGFSPISSDDGPFQFHGCTRKSTSCIDTDVTFLNLTNIKLDSPDKEMPAETEADCQSLCLNICADSPCQAYSFNSSHSDPDSYSCKIWTRKLPTLLEDYDRGRFLSIPVRRSDIEATAKTCEPCGTYAIPYPLSTGPNCGDPMYDKFNCSKSTGNVRFLMPGGISYPVTRINEDTRMFYVETSGSYSCSSTYQYDTPNFPFNVIECHQDDEIVKISWLPAPEPPCSNLTHCNNWPHSTCRATNGFGKQRRCHCDSNYSWNSSTMSCTREEPSSNHSTKRLALILTLVLAGMAILSCIIAFAIVRRKKISHNLDRASTQIRESLYESERHVKGLIGLASLEEKNIEGIEVPFYTFASIVAATNKFSDSNKLGRGGYGPVYKGTFPGGQDIAVKRLSSASTQGLEEFKNEVILIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFDRTRTLLLDWPMRFEIIVGIARGMLYLHQDSRLRVIHRDLKTSNILLDEDMNPKISDFGLAKMFGGKETEATTQRVVGTYGYMAPEYALDGLFSIKSDVFSYGVVLLEILSGKKNTGFYQSKQISSLVGYAWKLWTENKLLDLMEPSLGETCNENEFIRCALIGLLCIQDEPGDRPTMSNVLTMLDSETVTMPIPTQPTFFINKHLSSSASSSSKPEISLQFESSYQEGR 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16324g00004 1039 SUPERFAMILY Protein kinase-like (PK-like) 708 1027 IPR011009 -
Mupr16324g00004 1039 SMART ntp_6 386 468 IPR003609 -
Mupr16324g00004 1039 ProSiteProfiles PAN/Apple domain profile. 384 480 IPR003609 -
Mupr16324g00004 1039 ProSiteProfiles Protein kinase domain profile. 723 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16324g00004 1039 Pfam Protein tyrosine and serine/threonine kinase 726 993 IPR001245 GO:0004672|GO:0006468
Mupr16324g00004 1039 Pfam D-mannose binding lectin 133 222 IPR001480 -
Mupr16324g00004 1039 ProSiteProfiles Bulb-type lectin domain profile. 75 208 IPR001480 -
Mupr16324g00004 1039 SMART serkin_6 723 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16324g00004 1039 FunFam Receptor-like serine/threonine-protein kinase SD1-8 76 206 - -
Mupr16324g00004 1039 Gene3D - 76 207 IPR036426 -
Mupr16324g00004 1039 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 173 1018 - -
Mupr16324g00004 1039 Gene3D Transferase(Phosphotransferase) domain 1 799 1002 - -
Mupr16324g00004 1039 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Mupr16324g00004 1039 CDD B_lectin 99 209 IPR001480 -
Mupr16324g00004 1039 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 799 1002 - -
Mupr16324g00004 1039 SUPERFAMILY alpha-D-mannose-specific plant lectins 133 263 IPR036426 -
Mupr16324g00004 1039 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 689 798 - -
Mupr16324g00004 1039 Pfam S-locus glycoprotein domain 300 364 IPR000858 GO:0048544
Mupr16324g00004 1039 MobiDBLite consensus disorder prediction 1017 1039 - -
Mupr16324g00004 1039 CDD STKc_IRAK 729 995 - -
Mupr16324g00004 1039 SMART blect_4 93 209 IPR001480 -
Mupr16324g00004 1039 Gene3D Phosphorylase Kinase; domain 1 693 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16324g00004 Mupr-Chr16324 15381 22441 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16324g00004 713 1011 Receptor kinase-like Gene Family AT4G23140 59.016 6.02e-127 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr16324g00004 PK_Tyr_Ser-Thr 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16324g00004 - - gmx:100807185 1428.31