Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16318g00001 ATGGAGAAAACAGAGACAGAGGCAAACCCAGAGAGCAAAAAGATAAAGCGCATTAGGGACTCGAGCAAGCACCCTCTGTACCGTGGCGTGCGCATGCGGAACTGGGGGAAGTGGGTGTCGGAAATCCGCGAGCCGAGGAAGAAGTCACGGATATGGCTAGGCACATTCCCCACACCGGAAATGGCCGCGAGGGCGCACGACGTGGCGGCTCTGAGCATCAAAGGCTCCGCCGCAATTCTCAACTTCCCCCACCTGGCAAACTCGCTCCCCCGTCCGGCTTCACTGGCTCCGCGCGACGTCCAAGCCGCGGCGGCCAAGGCGGCGCACATGGACCCCTCCTCTCTCTCCTCCCTCGTCTCCGCAATGGACTTGTCCTCTGCCTCCGACGAGCTCACTCAGATTGTGGAGCTTCCTTCCTTGGAAAGCACCGACGATGCCTCCCTCGAATTCGACAAAGACTTTGTCTTCGTCGACTCCCTCGACGCCTGGATGTATCAACCACCCTTTGCTTTTGACACCGAACAAGCTTTCGAGGGTTTCACGTGGAATTACTAG 555 0.5856 MEKTETEANPESKKIKRIRDSSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGSAAILNFPHLANSLPRPASLAPRDVQAAAAKAAHMDPSSLSSLVSAMDLSSASDELTQIVELPSLESTDDASLEFDKDFVFVDSLDAWMYQPPFAFDTEQAFEGFTWNY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16318g00001 184 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 5 146 - -
Mupr16318g00001 184 CDD AP2 25 85 IPR001471 GO:0003700|GO:0006355
Mupr16318g00001 184 MobiDBLite consensus disorder prediction 1 22 - -
Mupr16318g00001 184 FunFam Ethylene-responsive transcription factor 2 25 84 - -
Mupr16318g00001 184 Pfam AP2 domain 25 75 IPR001471 GO:0003700|GO:0006355
Mupr16318g00001 184 SUPERFAMILY DNA-binding domain 26 84 IPR016177 GO:0003677
Mupr16318g00001 184 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Mupr16318g00001 184 PRINTS Ethylene responsive element binding protein signature 49 65 IPR001471 GO:0003700|GO:0006355
Mupr16318g00001 184 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Mupr16318g00001 184 Gene3D AP2/ERF domain 26 84 IPR036955 GO:0003700|GO:0006355
Mupr16318g00001 184 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16318g00001 Mupr-Chr16318 1255 1809 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16318g00001 5 184 AP2-EREBP Transcription Factor Family AT5G11590 60.500 2.50e-72 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr16318g00001 AP2 4.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16318g00001 K09286 - gmx:100813069 320.087