Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16315g00001 TGGACTCACTCGTCTCTTGCCTATGCACAAACATCTCGAAGGTGCAATAAAGTGAGACATGAGACTAACAATGCTTTTAAACTACCTTCAAAACTAAGAATGATCATAATATCACGCCTTACATTACTGCTTGCGTTTATTTTTCTTTCATTCATCGCGAATACTGGTCAATTGGTATTTGCAAAAGGGAGAGACAATGTGAGAGACGCTTGTAGAGTAACTAGGTATCCAGACTTTTGTGTCCGCTCGCTAGCACCTTTCTCTAACAGTGCTGGAAAAAGTCCCAGCAAGTGGGCAAGAGCGGGAGTATCAGTGACAATTGGTGAGGTTAAGAATGTTAAAGCATATCTGGCGAACTTGAAGAGGCATGGGCGTATAAGAGGAAGAAACAGAGTTGCACTTTCAGATTGTGTTGAGTCTTTTGCAGATGCCCTTGATGAGCTTCACAAATCACTGGGTGTGCTCAGAAGGCTTAGCAGAAGCACGTTTGGTTCCCAGATGGGGGACCTCAATACATGGATAAGTGCAGCTCTGACTAATGAAGATACTTGCCTCAATGGGTTTCAAGGCGAAAAGGAGAGAAAAATTAAGTTGCTGCAGAATCGGGTTCTGAAAGTCTATTATATAACCAGTAACGCTCTAGCTCTTGTCAACAAACTTACTACTACAGGTCTAGGAAGCATATCTGATCCA 693 0.4257 WTHSSLAYAQTSRRCNKVRHETNNAFKLPSKLRMIIISRLTLLLAFIFLSFIANTGQLVFAKGRDNVRDACRVTRYPDFCVRSLAPFSNSAGKSPSKWARAGVSVTIGEVKNVKAYLANLKRHGRIRGRNRVALSDCVESFADALDELHKSLGVLRRLSRSTFGSQMGDLNTWISAALTNEDTCLNGFQGEKERKIKLLQNRVLKVYYITSNALALVNKLTTTGLGSISDP 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16315g00001 231 NCBIfam pectinesterase inhibitor domain 39 221 IPR006501 GO:0004857
Mupr16315g00001 231 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 221 IPR035513 -
Mupr16315g00001 231 PANTHER PECTINESTERASE INHIBITOR-LIKE 43 216 - -
Mupr16315g00001 231 Gene3D Invertase/pectin methylesterase inhibitor family protein 64 222 IPR035513 -
Mupr16315g00001 231 Pfam Plant invertase/pectin methylesterase inhibitor 66 216 IPR006501 GO:0004857
Mupr16315g00001 231 CDD PMEI-like_3 70 222 - -
Mupr16315g00001 231 SMART PMEI_2 62 216 IPR006501 GO:0004857
Mupr16315g00001 231 FunFam Pectinesterase inhibitor 3 62 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16315g00001 Mupr-Chr16315 1700 2541 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16315g00001 67 225 Carbohydrate Esterase AT3G14310 33.333 9.85e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16315g00001 - - gmx:100791264 266.929