Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16292g00001 ATGTGTAACAGATGGGAGTTTCCTAACCCCACAACACAAGACAATTTATCTAAAGTGGTGAATTTGGGCAAGGACACAAAGGTTTGGATGGAGGAAAAACCGTTCCCTGCATGGTCATGGTCTGTTGAACAGTGTTTGAAAGAGTATGGTGTGAAACTGGACAAGGGTCTGAGTACTTGTGAGATTCAGAAGCGGCGCGAGAAGTATGGTTGGAATGAGCTAGCAAAGGAGAAAGGGAAGCCCTTGTGGGAACTAGTGTTGGAACAATTTGATGACACGCTGGTGAAGATACTTCTGGTTGCAGCCTTCATATCATTTCTTTTGGCATACTTTCATGGAAGTGACTCAGGTGAGTCTGGATTTGAGGCTTATGTGGAGCCCCTTGTCATCATTTTGATTTTGGTCCTTAATGCCATTGTTGGGGTTTGGCAAGAGAACAATGCAGAAAAGGCTCTTGAGGCTCTCAAAGAGTTGCAATGTGAGTCTGGAAAAGTGTTAAGGGATGGCTATTTTGTGCCTGATTTGCCTGCAAGAGAGCTTGTTCCTGGTGATATTGTGGAGTTGCATGTTGGAGATAAGGTCCCTGCGGACATGAGAGTTGCGGCTTTGAAAACCTCAACGCTGCGCGTTGAGCAAAGTTCGTTAACCGGAGAAGCAATGCCTGTTCTCAAGGGGACAAATCCTGTTTTCTTGGACGATTGTGAGTTGCAGGCTAAAGAAAACATGGTGTTTGCAGGCACCACTGTTGTCAATGGTAGTTGTGTTTGTGTTGTTATCACCACAGGAATGGACACTGAAATTGGAAAGATACAGAAGCAGATACACGAGGCTTCTCAGGAGGAGAGTGACACCCCTTTGAAGAAGAAGCTAGATGATTTTGGTGGCAGGCTTACAACTGCAATTGGGGTAGTTTGTCTCATTGTTTGGGTTATTAACTACAAGAATTTCATTTCTTGGGATGTTGTGGATGGATGGCCCTCAAACATCAAATTTTCTTTCCAAAAGTGTACCTACTATTTCAAAATTGCTGTTGCTCTTGCTGTTGCCGCAATCCCTGAAGGTCTTCCTGCTGTTATCACAACTTGTTTAGCACTTGGCACGCGGAAAATGGCTCAAAAGAATGCAATTGTGAGAAAGCTTCCAAGTGTGGAAACTTTGGGATGTACCACTGTGATATGCTCAGACAAAACTGGCACTTTGACAACAAATCAGATGGCTGTGACAGAGTTCTTTACTTTGGGAGGGAAAACCACTGCTTCTAGACTCATTAGTGTTGAAGGCACAACTTATGATCCCAAAGATGGGGGGATTGTTGATTGGGGGTGCTATAACATGGATGCTAATTTGCAAGTCATGGCGGAAACATGTGCTGTTTGCAATGATGCTGGGATTTACTTTGATGGTCGCCTTTTTCGAGCCACAGGGTTGCCTACTGAAGCTGCTCTCAAAGTTTTGGTGGAAAAGATGGGAGTTCCAGATGTGAAGTCAAGGAGCAAAATTCGAGATAATGCACAACTTGCTGCAAACAACATAATGGATGGCCACACTGTGGTGAAATTAGGATGTTGTGAGTGGTGGAACAAAAGATCCAAAAGGGTAGCTACATTGGAGTTTGATCGCATTCGGAAGTCAATGAGTGTCATTGTTCGTGAACCAGATGGTCAAAATAGGCTTCTTGTCAAGGGTGCTGTTGAGAGTTTACTCGAGCGTAGTTCACATGTGCAACTTGCTGATGGATCCATGGTTCCAATAGATGACCAATGCAAAGAACTACTTCTTCAAAGACTCCAGGAGATGAGTTCAAAGGGATTGCGTTGCTTGGGTTTGGCATATAATGATGACTTAAAAGAATTTTCAGACTATTATGCCGACACTCATCCTGCTCACAAGAAATTGCTTGATCCAACATACTACTCATCCATTGAAAGTGATCTAGTTTTTGTTGGCATTGTTGGCTTAAGGGACCCTCCTCGTGAGGAAGTTCACAAAGCAATTGAGGATTGTAAGGAAGCTGGCATTAGAGTTATGGTAATAACTGGAGATAATAAGTCAACAGCAGAGGCTATTTGTAGGGAAATAAAATTGTTCTCTAAAGATGAGGATCTCGCAGGGAAAAGTTTGACTGGTAAGGAATTCATATCTCTTCCTCATTCAGAACAAGTTAAAATATTGTTGAGGCCTGGAGGCAAGGTTTTCTCTCGAGCTGAACCTAGACACAAGCAAGAAATTGTTAGACTACTGAAGGAAATGGGGGAGATTGTTGCAATGACCGGAGATGGTGTGAATGATGCACCTGCACTTAAGCTTGCCGACATAGGGATTGCTATGGGCATAACTGGGACAGAGGTTGCAAAAGAAGCTTCAGATATGGTGCTTGCAGATGATAATTTTAGTACCATAGTTTCAGCTGTTGCTGAGGGTCGCTCTATTTATGATAACATGAAGTCATTTATAAGGTACATGATATCATCAAATGTTGGGGAAGTAATATCCATATTCTTGACTGCTGCTTTGGGGATCCCAGAATGCATGATACCAGTGCAACTTCTGTGGGTGAATTTGGTTACTGATGGTCCACCTGCTACAGCTCTTGGTTTTAACCCTGCTGATGTTGATATCATGCAGAAGCCACCTCGCAGAAGTGATGATGCTCTAATAAGTTCTTGGGTTCTTTTCCGTTATCTGGTAATTGGTTCCTATGTGGGACTAGCAACAGTTGGCATTTTTGTCTTGTGGTACACTCAAGCATCTTTTCTAGGCATCAACCTTGTGAGTGATGGTCACACAATTATAGAATTTTCCCAACTTCGCAACTGGGGGGAGTGCCCCTCATGGTCTAATTTCACTGTTGCTCCATTTGCGGTTGGAGGGGGTCGCATGATCACATTTTCAAATCCTTGTGACTATTTCTCAGTTGGCAAGGTAAAGGCCATGACTCTCTCTCTCTCGGTCTTGGTGGCAATTGAGATGTTCAACTCTTTGAATGCCCTCTCAGAAGAGAATAGCTTGATGAAACTACCACCTTGGAGGAACCCTTGGCTTTTGGTTGCCATGTCAATATCATTAGGATTCCATTGCCTCATACTCTACACCCCATTCCTTGCAGAAGTGTTTGGTGTTATTGCACTTAGTTTGAATGAGTGGTTTATGGTCCTTTTAATATCAGCACCTGTTATTCTTATTGATGAGTTTCTAAAACTAGTGGTGAGAAGTCAAAGGAGGTTGACCAAGGAGAAAGAAGCATGA 3246 0.4313 MCNRWEFPNPTTQDNLSKVVNLGKDTKVWMEEKPFPAWSWSVEQCLKEYGVKLDKGLSTCEIQKRREKYGWNELAKEKGKPLWELVLEQFDDTLVKILLVAAFISFLLAYFHGSDSGESGFEAYVEPLVIILILVLNAIVGVWQENNAEKALEALKELQCESGKVLRDGYFVPDLPARELVPGDIVELHVGDKVPADMRVAALKTSTLRVEQSSLTGEAMPVLKGTNPVFLDDCELQAKENMVFAGTTVVNGSCVCVVITTGMDTEIGKIQKQIHEASQEESDTPLKKKLDDFGGRLTTAIGVVCLIVWVINYKNFISWDVVDGWPSNIKFSFQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTEFFTLGGKTTASRLISVEGTTYDPKDGGIVDWGCYNMDANLQVMAETCAVCNDAGIYFDGRLFRATGLPTEAALKVLVEKMGVPDVKSRSKIRDNAQLAANNIMDGHTVVKLGCCEWWNKRSKRVATLEFDRIRKSMSVIVREPDGQNRLLVKGAVESLLERSSHVQLADGSMVPIDDQCKELLLQRLQEMSSKGLRCLGLAYNDDLKEFSDYYADTHPAHKKLLDPTYYSSIESDLVFVGIVGLRDPPREEVHKAIEDCKEAGIRVMVITGDNKSTAEAICREIKLFSKDEDLAGKSLTGKEFISLPHSEQVKILLRPGGKVFSRAEPRHKQEIVRLLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYDNMKSFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRRSDDALISSWVLFRYLVIGSYVGLATVGIFVLWYTQASFLGINLVSDGHTIIEFSQLRNWGECPSWSNFTVAPFAVGGGRMITFSNPCDYFSVGKVKAMTLSLSVLVAIEMFNSLNALSEENSLMKLPPWRNPWLLVAMSISLGFHCLILYTPFLAEVFGVIALSLNEWFMVLLISAPVILIDEFLKLVVRSQRRLTKEKEA 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16292g00001 1081 FunFam Calcium-transporting P-type ATPase, putative 651 802 - -
Mupr16292g00001 1081 Pfam Cation transporter/ATPase, N-terminus 38 105 IPR004014 -
Mupr16292g00001 1081 SFLD C1.7: P-type atpase like 374 809 - -
Mupr16292g00001 1081 FunFam Calcium-transporting ATPase, putative 140 275 - -
Mupr16292g00001 1081 PRINTS Sodium/potassium-transporting ATPase signature 386 407 - -
Mupr16292g00001 1081 PRINTS Sodium/potassium-transporting ATPase signature 1010 1034 - -
Mupr16292g00001 1081 SUPERFAMILY Calcium ATPase, transduction domain A 165 273 IPR008250 -
Mupr16292g00001 1081 NCBIfam HAD-IC family P-type ATPase 730 841 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr16292g00001 1081 NCBIfam HAD-IC family P-type ATPase 331 418 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr16292g00001 1081 SUPERFAMILY Calcium ATPase, transmembrane domain M 36 1072 IPR023298 -
Mupr16292g00001 1081 Gene3D - 55 277 - -
Mupr16292g00001 1081 ProSitePatterns E1-E2 ATPases phosphorylation site. 395 401 IPR018303 -
Mupr16292g00001 1081 Pfam Cation transporting ATPase, C-terminus 842 1068 IPR006068 -
Mupr16292g00001 1081 Gene3D - 88 1070 - -
Mupr16292g00001 1081 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 400 653 IPR023299 GO:0000166
Mupr16292g00001 1081 SFLD p-type atpase 374 809 IPR044492 -
Mupr16292g00001 1081 PANTHER CALCIUM-TRANSPORTING ATPASE 42 1078 - -
Mupr16292g00001 1081 Pfam haloacid dehalogenase-like hydrolase 390 771 - -
Mupr16292g00001 1081 SUPERFAMILY HAD-like 391 861 IPR036412 -
Mupr16292g00001 1081 CDD P-type_ATPase_SERCA 38 1070 - -
Mupr16292g00001 1081 Pfam E1-E2 ATPase 159 373 - -
Mupr16292g00001 1081 Gene3D - 390 802 IPR023214 -
Mupr16292g00001 1081 Gene3D - 403 656 IPR023299 GO:0000166
Mupr16292g00001 1081 PRINTS P-type cation-transporting ATPase superfamily signature 671 681 - -
Mupr16292g00001 1081 PRINTS P-type cation-transporting ATPase superfamily signature 781 793 - -
Mupr16292g00001 1081 PRINTS P-type cation-transporting ATPase superfamily signature 211 225 - -
Mupr16292g00001 1081 PRINTS P-type cation-transporting ATPase superfamily signature 393 407 - -
Mupr16292g00001 1081 PRINTS P-type cation-transporting ATPase superfamily signature 649 660 - -
Mupr16292g00001 1081 PRINTS P-type cation-transporting ATPase superfamily signature 757 776 - -
Mupr16292g00001 1081 SMART Cation_ATPase_N_a_2 36 110 IPR004014 -
Mupr16292g00001 1081 FunFam Calcium-transporting ATPase, putative 238 389 - -
Mupr16292g00001 1081 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 821 1075 - -
Mupr16292g00001 1081 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 403 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16292g00001 Mupr-Chr16292 5787 11527 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16292g00001 31 1079 Primary Pumps ATPases(2) AT4G00900 78.158 0.0 1708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16292g00001 K01537 - gmx:100792952 1998.79