LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr16286g00001	ATGGAGAAGAGCAGCGAAGGAAGCGTTGGATCGCACAGCCATCACTGTGAAATTCCTTTGCTGGCTTCACTTCACCAGCAACTACCTCTGTTCCCCATGTCACGTATGTATTCTATTCTCTTCAACTTTGGCGCTTTTCCGATACCCTTTTCACTCAATTACATAATCCCCTGCTCGCAGGCCTATGGGGTTAGCATGCTCCCCACCCTCAATGTCGCCGGCGACGTCCTTCTCGCCGACCACCTCTCTCCTCGGATCGGGAACATCGGCCATGGAGACTTGGTTCTTGTTCGGTCCCCTCTGAACCCTAACATCAGGTTGACGAAGCGCATCGTCGCCATGGAAGGGGACACCGTCACTTACTTCGACCCTTTGCACTCTGAAGCTGCTCAAGTTGCAGTGGTGCCAAAGGGGCATGTTTGGATTCAAGGGGATAACATTTATGCTTCCCGTGATTCACGGCATTTTGGTCCAGTTCCATATGGTCTTATACAAGGAAAAGTGTTTTTCCGGGTAACTGTTGTGCCTCATACATACAACATTCTTTTATATTTTAAGAATTGGTTTGTTAGTCTTGAAATGAACACTGTGACCTTGACTATAGAGAAAAAATCATTGAGTAAAGAAATAGTGATTGGCAGAGAGATCAAGAGGAGGAATAAAGTTTGTGAACTTCCACTAGGGTGTGATCCCAGAGTTGCCAAAATAAACTCTGGCTACGAAGGTTGTCAAGAAGCAACTCTCTTTGGTAATGGCTTATGCTCCTCATTAAGAGCAAGGGCTGACGAGGTGGTC	795	0.4692	MEKSSEGSVGSHSHHCEIPLLASLHQQLPLFPMSRMYSILFNFGAFPIPFSLNYIIPCSQAYGVSMLPTLNVAGDVLLADHLSPRIGNIGHGDLVLVRSPLNPNIRLTKRIVAMEGDTVTYFDPLHSEAAQVAVVPKGHVWIQGDNIYASRDSRHFGPVPYGLIQGKVFFRVTVVPHTYNILLYFKNWFVSLEMNTVTLTIEKKSLSKEIVIGREIKRRNKVCELPLGCDPRVAKINSGYEGCQEATLFGNGLCSSLRARADEVV	265

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr16286g00001	265	CDD	S26_SPase_I	63	168	IPR019533	GO:0004252\|GO:0006465
	Mupr16286g00001	265	Gene3D	Umud Fragment, subunit A	53	188	-	-
	Mupr16286g00001	265	Pfam	Signal peptidase, peptidase S26	131	172	IPR019533	GO:0004252\|GO:0006465
	Mupr16286g00001	265	Pfam	Signal peptidase, peptidase S26	58	121	IPR019533	GO:0004252\|GO:0006465
	Mupr16286g00001	265	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	135	154	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Mupr16286g00001	265	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	107	119	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Mupr16286g00001	265	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	54	70	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Mupr16286g00001	265	SUPERFAMILY	LexA/Signal peptidase	58	173	IPR036286	-
	Mupr16286g00001	265	FunFam	Inner membrane protease subunit 1	52	180	-	-
	Mupr16286g00001	265	PANTHER	PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED	52	176	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr16286g00001	Mupr-Chr16286	5415	9833	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr16286g00001	66	172	MADS-box Gene Family	AT1G29960	51.852	3.21e-33	115

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr16286g00001	K09647		-	gmx:100527597	214.542