Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16284g00006 ATGAATGTGAAGCAAGGTAGCAAGACAATGGCATCTTCTTCGAACCCACCATGCGCGGCGTGCAAGTTCCTGCGGAGAAAGTGCCAAGCGGAGTGCGTGTTTGCGCCCTACTTCCCACCCGACCAGCCTCAGAAGTTCGTCAACGTTCACAGAATATTCGGTGCCAGCAACGTCTCCAAGCTTCTCAACGAGCTTCACCCTCACCAGCGTGAAGACGCCGTTAACTCTCTCGCCTACGAGGCCGAGATGCGCCTCCGCGATCCCGTCAACGGCTGCGTCGGCATCATCTCGCTACTGCACCAACAGCTTCGCCAGCTTCAAATGGATCTTCAGACTGCCAAGTTTGAGCTCTCCAAGATCCAAAGCTTAGGCATAACCACCGGTTATGGTCACGCTGTTGGTGCTGTTACCACGGCCGTCGCCGTTAACACAAGTCATGGTGTTAACGGTGGCGGCCATGGTAACCGCTGTTATAATTATAACCAACTACATCAACATCATTATCATCAGTGTGTGCCACAGCAATTAGGTAGGAACTTTGATGCAGGGAACAACTGTGAGGCTAATGTGTTGGCCATGAACATTGCTAGTTTTGGGCAGTTGAGTCAGCTTCAGCAGCCTAGTGCTGCTGCTGTTGCTGCTCGTGATGACCACACTAGGAGATTTGACATTACATAG 678 0.5192 MNVKQGSKTMASSSNPPCAACKFLRRKCQAECVFAPYFPPDQPQKFVNVHRIFGASNVSKLLNELHPHQREDAVNSLAYEAEMRLRDPVNGCVGIISLLHQQLRQLQMDLQTAKFELSKIQSLGITTGYGHAVGAVTTAVAVNTSHGVNGGGHGNRCYNYNQLHQHHYHQCVPQQLGRNFDAGNNCEANVLAMNIASFGQLSQLQQPSAAAVAARDDHTRRFDIT 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16284g00006 225 ProSiteProfiles LOB domain profile. 16 117 IPR004883 -
Mupr16284g00006 225 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 15 172 - -
Mupr16284g00006 225 Pfam Lateral organ boundaries (LOB) domain 17 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16284g00006 Mupr-Chr16284 54675 55765 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16284g00006 11 223 AS2 family AT1G65620 57.407 8.80e-69 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr16284g00006 LOB 2.3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16284g00006 - - gmx:100801155 289.271