Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16272g00003 ATGGCTTCCCAACAATCTCTGCTAGACAAGCCTCGAAAATCCGTTTCCAAAACTATCTGGTTAATTCTCTCTGTAGCTGTCCTAAGCTCATCCGCTCTTATTGCTTCATATTTCATCAAACCCACTTCCTTCTTCAACCTCTCATCCTCTTACCATGTTTGTCGTCATGCACTTGATACTGCATCCTGCATGGCACATGTCTCAGAAGTAGCTCAAGCTCCAGTATTGACCACCACAAAGGATAACGAGTTCAATTTGCTACGGTCCTTCTTAATGAAATCCACCTCACACATAGAGAGGGCTATGAACACAGCTAACACTATCAAAAATAGGATCAACAGTCCGAGGGCGGAAGCAGCTTTGCGAGACTGTGTGGAGCTGATGGACATGTCCATGGAAAGAATTTGGGACTCAATGGTGGCTCTAACAAAACAAACCATTGAGTCACAGGAAGATGCACATACATGGCTAAGTACTGTGCTTACTAACCATGAAACTTGCTTGGATGGATTGGAGGGACCAGCTCGGTCCCTTATGGAAGCAGAGCTTCAGGACTTGATATCCAGAGCAGGAACCTCTTTGGCCTTGTTTGTTGCTGCTTTACCTCCAAAGGTTGACAATATCATCGGTGAGAATTTAAATATGGATTTTCCCTCGTGGGTGACAAGCAAGGATAGAAAGCTTTTGGAGTCTACGGCCAAGGATATCAAACCCAATGTTGTGGTGGCTACGGATGGGACTGGCAACTACATGACTGTGGCTGAAGCCGTGGAATCTGTACCCAATAAGAGCAATAAAAGGTACATTATCTATATAAAAAACGGAACATATAATGAGCATGTTGAAATTAGCAGTCAGAAGAAGAATGTGATGCTGGTGGGTGATGGTATGAATGAAACTATAATCTCTGGGAGTTTGAATCGCGCGGACGGAACGGGTACCTTTCAGACTGCCACCGTTGCGGCGGTTGGGGATGGGTTTATAGCCCAGGACATCCAATTCAGAAACACAGCAGGTTCAATCAAGGAACAAGCAGTGGCTCTCCGCGTCGGGGCTGATCAGGCTATCATAAACCGCTGCAAAATCGCCGCATGTCAAGACACTCTCTATGCTCATTCTAACAGGCAATTCTACCGTGACTCCTTCATCAGTGGCACCGTTGACTTCATATTCGGAAATGCAGCTGTTGTGTTACAGAAGTGCAAGTTGGTTGCCCGAAAGCCCTTGAGTTATCAAAACAATATGGTCACGGCTCAAGGACGAACAAATCCAAACCAAAACACAGGAACTTCGATTCAACAATGTAACATAATACCAGCCACGGATCTTAAGCCAGTAATGAAATCCATTAAAACTTATCTGGGCCGCCCATGGCAGAAATACTCGAGAACTGTTGTCATGCAATCATTGCTAAGCAACCATATTGATCCAAAAGGATGGTCAGAGTGGGATGACCAACATAAGGACTATTTGGAAACGTTGTATTATGGAGAATACTCGAACCGTGGACCAGGTGCCGGTCTTGGTGGGAGAGTGAATTGGACTGGTTTCCATATCCTCACAACTGCAGATGCCATGAAGTTTACAGTAAAACAGTTCATCCAAGGTGATGTATGGTTGGCTAACAAAGGAGTGAACTACATAGAGTCCCTTTAG 1656 0.4493 MASQQSLLDKPRKSVSKTIWLILSVAVLSSSALIASYFIKPTSFFNLSSSYHVCRHALDTASCMAHVSEVAQAPVLTTTKDNEFNLLRSFLMKSTSHIERAMNTANTIKNRINSPRAEAALRDCVELMDMSMERIWDSMVALTKQTIESQEDAHTWLSTVLTNHETCLDGLEGPARSLMEAELQDLISRAGTSLALFVAALPPKVDNIIGENLNMDFPSWVTSKDRKLLESTAKDIKPNVVVATDGTGNYMTVAEAVESVPNKSNKRYIIYIKNGTYNEHVEISSQKKNVMLVGDGMNETIISGSLNRADGTGTFQTATVAAVGDGFIAQDIQFRNTAGSIKEQAVALRVGADQAIINRCKIAACQDTLYAHSNRQFYRDSFISGTVDFIFGNAAVVLQKCKLVARKPLSYQNNMVTAQGRTNPNQNTGTSIQQCNIIPATDLKPVMKSIKTYLGRPWQKYSRTVVMQSLLSNHIDPKGWSEWDDQHKDYLETLYYGEYSNRGPGAGLGGRVNWTGFHILTTADAMKFTVKQFIQGDVWLANKGVNYIESL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16272g00003 551 PANTHER PECTINESTERASE 28 541 - -
Mupr16272g00003 551 ProSitePatterns Pectinesterase signature 1. 264 283 IPR018040 -
Mupr16272g00003 551 NCBIfam pectinesterase inhibitor domain 53 175 IPR006501 GO:0004857
Mupr16272g00003 551 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 197 IPR035513 -
Mupr16272g00003 551 FunFam Pectinesterase 233 551 - -
Mupr16272g00003 551 Pfam Plant invertase/pectin methylesterase inhibitor 52 186 IPR006501 GO:0004857
Mupr16272g00003 551 Gene3D Invertase/pectin methylesterase inhibitor family protein 51 199 IPR035513 -
Mupr16272g00003 551 SUPERFAMILY Pectin lyase-like 237 548 IPR011050 -
Mupr16272g00003 551 ProSitePatterns Pectinesterase signature 2. 383 392 IPR033131 -
Mupr16272g00003 551 FunFam Pectinesterase 3 51 200 - -
Mupr16272g00003 551 SMART PMEI_2 45 196 IPR006501 GO:0004857
Mupr16272g00003 551 Pfam Pectinesterase 239 537 IPR000070 GO:0030599|GO:0042545
Mupr16272g00003 551 CDD PMEI-like_4 56 199 - -
Mupr16272g00003 551 Gene3D - 233 551 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16272g00003 Mupr-Chr16272 15820 17576 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16272g00003 3 551 Carbohydrate Esterase AT1G11580 50.267 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16272g00003 K01051 - gmx:100815836 792.341