LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr16272g00001	ATGACAAGTGCATTGGTATATATATCACTATCACTAGTGGTATTGTTCTTGCTTTCATGTGGAATTCATGAGTGTGAAGGCCAAGATCCCGAGGCTCTCCCTCCATCAGCAGAAAGTTGTAACGGGATTTTCATTTCCTATGACTTTCTGACTCGAAGGAAAGGATTCCCTCGTGTGAAGAATGTGACAGCGCAGTCTTGGGCCTTCAATGCCACAGCAACAGTTCTTAACACAGGCAAAGAGGTGGTTAAGGCGTGGAAGTTGTTCATAGGGTTTCAACATGATGAGATTCTAGTTGCTGCCAGTGGAGCTCAACTATTAGATGGAACTGACTTCCCTACTTTGGTAGGAAATGGCACTACCTTTGCTGGAGCTTCTCTGCCTGATTTGGATAGCTCCATCAACACAGCTCAAGATTTGTCCCAAATGCAAGCAGTCATCCAGCTTCTTGGCACCCAGTTTGGAGTAAAGCCTCCTACAATTCCTATGCCTAAAACCATCAAGTTGGTAAATGATGGATACAAGTGCCCCCTACCTAGTATCCGTAAGAGTTCCATGTGGGCGTGTTGTAAAAAAGACCCAAAATTCAAGGCTACACTTCGGAAGACAAAATTCTTGGTACGCCAAAAAGGGGATCTTCCCATATCCTATGACGTTCTTCAAGTGTATGAGAATAATTATATGGTTCAGGTGACGATGGATAATGATCACCTTTTGGGACGTCTAGATCATTGGAACTTGACTTGGGAGTGGACAAGAGGGGAATTTATATACAGTATGAAAGGTGCTTTCACACGTGAGATAGACTACTCAGGTTGCATCTATGGTGCTGCAGGACAGTATTACAGGGACATGGATTTCTCTAAAGTCATTAACTGTCAAAAGAATCCAGTAATCAGTGACTTGCCTCCAGAGAAATATGAGGACAATGATATTGGAAAGATACCTCACTGTTGCAAAGACGGAACTCTTTTACCTACCCTTATGGATGCAACCAAGTCCAAGTCTGTTTTCCAAATGCAAGTGTTCAAAATTCCACCTGATTTAAACAAAACAGCAATTTTTCCTCCAGAGAAATGGAAAATAAGGGGCATTCTAAATCCGGATTACAGATGTGGATCACCTTTTAGAGTGGAACCAGTGCGATTTCCAGACCCTAAGGGACTTGAAGCATCGGTTATTGCCATTGCAAGTTGGCAAATAGTCTGCAATATCACTAAGCCAACCAAGAGGACTACTCGTTGTTGTGTTTCTTTCTCTGCTTATTACAATGAATCCGTAGTACCTTGCAACACATGTGCTTGTGGTTGTGATGATGATAATACAAAACACTGCAATCCAAATTCAGCAGCAATGCTTCTCCCTTCAGAAGCTCTTCTTGTACCCTTTGAGAATAGGACACAAAAGTCAGTTGCTTGGGCCAAACTAAAGCGTTTTCAAGTCCCTAGAAAATTACCATGTGCTGACAATTGTGGAGTTAGCATAAACTGGCATGTAGCTTCGGACTTCAAAGGTGGGTGGAGTGCCAGAATCACTCTCTTCAATTGGCAGCCTCAGAATTTTGAGAATTGGTTCACTGCACTGCAATTCAAGAAGGCTTCTCTTGGTTATGAAAGAGTGTATTCTTTTAATGGAACATTCCTTCCACGGCTCAACCGTACTATTTTCTTGCAAGGATTCCAAGGATCAAACTTTTTGATAGGTGAAGATAATAAAACAAACCCTAAGGTGCCCGGAAAACAACAATCTGTTATTTCCTTTACTAAGAAATTTACACCAGACATCCACATTGCAAAAGGAGATGGGTTCCCTTCAAAGGTCCTTTTTAATGGTGAAGAGTGTTCTATTCCTACCAGATTCCCTGTGGGAAGTGGAAACCAACGTAATGTAGATTTAGTACATGAACTATTAGTTTTAGTTTTAGCTTTTACAATTAGTCAAACACTGTATTAA	1953	0.4142	MTSALVYISLSLVVLFLLSCGIHECEGQDPEALPPSAESCNGIFISYDFLTRRKGFPRVKNVTAQSWAFNATATVLNTGKEVVKAWKLFIGFQHDEILVAASGAQLLDGTDFPTLVGNGTTFAGASLPDLDSSINTAQDLSQMQAVIQLLGTQFGVKPPTIPMPKTIKLVNDGYKCPLPSIRKSSMWACCKKDPKFKATLRKTKFLVRQKGDLPISYDVLQVYENNYMVQVTMDNDHLLGRLDHWNLTWEWTRGEFIYSMKGAFTREIDYSGCIYGAAGQYYRDMDFSKVINCQKNPVISDLPPEKYEDNDIGKIPHCCKDGTLLPTLMDATKSKSVFQMQVFKIPPDLNKTAIFPPEKWKIRGILNPDYRCGSPFRVEPVRFPDPKGLEASVIAIASWQIVCNITKPTKRTTRCCVSFSAYYNESVVPCNTCACGCDDDNTKHCNPNSAAMLLPSEALLVPFENRTQKSVAWAKLKRFQVPRKLPCADNCGVSINWHVASDFKGGWSARITLFNWQPQNFENWFTALQFKKASLGYERVYSFNGTFLPRLNRTIFLQGFQGSNFLIGEDNKTNPKVPGKQQSVISFTKKFTPDIHIAKGDGFPSKVLFNGEECSIPTRFPVGSGNQRNVDLVHELLVLVLAFTISQTLY	650

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr16272g00001	650	Pfam	COBRA-like protein	227	406	IPR006918	GO:0010215\|GO:0016020
	Mupr16272g00001	650	PANTHER	COBRA-LIKE PROTEIN 7	9	644	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr16272g00001	Mupr-Chr16272	1288	3664	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr16272g00001	8	642	COBRA Gene Family	AT3G20580	55.760	0.0	750

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr16272g00001	-		-	gmx:100799716	1113.21