Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16241g00003 ATGAAAGGACATTTTCCTAATCATGTGGTGCAAACCAAACCTCACGTGTACACCTATAGTACTACTACCACCAATCCGATCACCGAGAGTGATCCTCACGCGCCACGTAGGCGCGTAGGATTGACAGAGGCTATTCCTCCAAAAGGGGCCAAAGCGCATTCGTTCGTCACCGTTCACTCTCGCGAGCACCAATCAACCTTGATTGATGACAACTTGGCTGGTTTGGGCATCAAGAGCAAAAAGCAACCTTTGAAAATTATGGAAGCACGCAGTGCTTTCTCTATTGAAAAATCAAGTGCTAAGCAACTCAATAACATGGGGATATCTGAAGCACTTTCTTCATCGTTGCCTGTCCTGTCAACGCCTCTAGAAGAGACATACCCCAAATTACCTGATTCTCAGCCAGCTTTTATGGAAAAAGAGCTTAAAACAAAACCTTTTACTCATTCAAGTCATTTAACTTCCAGCGGAGCCGTTGGGCATATGTTTTCATCTTCTCCAGGATATTCAACTGATCTTCATCTCTCATCCTTTTCATCTCATGGAAAACACCCTAGAAGTACTCATTTTATTTCACAGACATTGAGTAACGTGGCTTCATTGCCATTATCTTATTCTTCAAATAGTGGACCAATACCTTCTTCAACATCAACCCCTTATTCCAATGGAAACAGTGTTTCCTGGCATACGGATTCTCTGCCAAGCTTTCTCGAATTCCCTGCCAATACCTCCATTGATAATAGTCAAGTAGAAAGCAGTGCCTGCAATATTATGACAGCTGAAGAGTATTCTAAGCGAAATGATTGGCAGGAGTGGGCTGACCAGTTAATCAGTGATGATGATCCTTTGACTTCTAACTGGAATGATCTTCTTGTTGACAACATTCAAGATCTTGAACCGAAGGTGGTGGACCAGGTCTCAAAATCATCTTCACAACTTTCGATAGGACACCAATCTGAAAGCCATCAACAACTGCCTGCTTCATCTGGAGAAAATCGTGTCGGTGTTGCCCCATCTTCCTCAGCAAATTCTGCACCTACCAAGCCACGGATGCGCTGGACACCAGAGCTTCATGAGGCATTTGTGGAGGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACTCCTAAAGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGCCACTTACAGAAATACAGGACAGCTAGATATAGACCCGAGTCATCTGAAGGAGCTGCAGAGAAAAAACTAAGTCCAATTGAAGAGATGCCATCTCTAGATTTGAAAACTGGTATTGAGATCACTGAAGCTCTGCGGCTGCAGATGGAGGTTCAGAAGCGGTTGCATGAACAGCTTGAGATTCAAAGAAATTTACAGTTGCGAATAGAAGAACAAGGAAGGTACCTTCAGATGATGTTTGAGAAGCAGTGCAAATCTGGCACGGAAACGTTTAAGGCATCATCGTCTGTCATTGAGAGTCCATCTGGAGTGTCTTCTGATCCCATGAAAGATTCTCCAGCAAAAACTGAATTAGAAACCGTCAAAGTGGACCATTGCAAGTCAGGACCTGATCAAACTAATGTCAGTACCACAGTTGAGGAAAGCTTATTGGAAGTGGGTGAGAAGCAGGATGCTCCTGAAAGTCAATCTTCTGAGAATCCTAAGCAACATGCTAGTGAAGATAGTGCTCAAGCCTCAAAACGTCCAAGGACAGAGGAGTAA 1725 0.4348 MKGHFPNHVVQTKPHVYTYSTTTTNPITESDPHAPRRRVGLTEAIPPKGAKAHSFVTVHSREHQSTLIDDNLAGLGIKSKKQPLKIMEARSAFSIEKSSAKQLNNMGISEALSSSLPVLSTPLEETYPKLPDSQPAFMEKELKTKPFTHSSHLTSSGAVGHMFSSSPGYSTDLHLSSFSSHGKHPRSTHFISQTLSNVASLPLSYSSNSGPIPSSTSTPYSNGNSVSWHTDSLPSFLEFPANTSIDNSQVESSACNIMTAEEYSKRNDWQEWADQLISDDDPLTSNWNDLLVDNIQDLEPKVVDQVSKSSSQLSIGHQSESHQQLPASSGENRVGVAPSSSANSAPTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGAAEKKLSPIEEMPSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGTETFKASSSVIESPSGVSSDPMKDSPAKTELETVKVDHCKSGPDQTNVSTTVEESLLEVGEKQDAPESQSSENPKQHASEDSAQASKRPRTEE 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16241g00003 574 Gene3D - 347 406 - -
Mupr16241g00003 574 Pfam MYB-CC type transfactor, LHEQLE motif 433 480 IPR025756 -
Mupr16241g00003 574 MobiDBLite consensus disorder prediction 309 348 - -
Mupr16241g00003 574 Pfam Myb-like DNA-binding domain 350 401 IPR001005 -
Mupr16241g00003 574 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 345 405 IPR017930 -
Mupr16241g00003 574 MobiDBLite consensus disorder prediction 506 520 - -
Mupr16241g00003 574 MobiDBLite consensus disorder prediction 483 574 - -
Mupr16241g00003 574 MobiDBLite consensus disorder prediction 309 350 - -
Mupr16241g00003 574 SUPERFAMILY Homeodomain-like 346 402 IPR009057 -
Mupr16241g00003 574 Coils Coil 436 456 - -
Mupr16241g00003 574 MobiDBLite consensus disorder prediction 483 503 - -
Mupr16241g00003 574 NCBIfam myb-like DNA-binding domain, SHAQKYF class 348 402 IPR006447 GO:0003677
Mupr16241g00003 574 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 317 569 IPR044848 GO:0003700
Mupr16241g00003 574 MobiDBLite consensus disorder prediction 545 561 - -
Mupr16241g00003 574 FunFam Myb family transcription factor 347 405 - -
Mupr16241g00003 574 MobiDBLite consensus disorder prediction 521 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16241g00003 Mupr-Chr16241 22563 29798 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16241g00003 141 526 G2-like Transcription Factor Family AT4G28610 50.127 3.06e-105 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr16241g00003 Myb_DNA-binding 1.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16241g00003 - - gmx:100810560 835.484