Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16241g00001 TCCGACTTGGAACCTCGTCTTGCAGATTTTGGCACAGCAAAGCTGCTAAGCTCCGACACTTCAACATGGACCTCAGTCGCTGGATCCTACGGCTACATGGCTCCAGAACTAGCTCAAACAATGAGGGTGAGCATAAAGTGTGACGTGTATAGTTTTGGAGTGGTGACTTTGGAGATAATGATGGGAAAGCATCCCGGAGAACTCTTGGGTACGCTTTCTTCAAACACGTGTTTGTGGTCAACAGAGGAAGCACAAGTGCTACTGAAGGATGTGCTTGACCAACGGCTTCCACCTCCCAGGGGCAGATTAGCAAAAGCCGTAGTGTTAACAGTGAGCATAGCTTTGGCATGCACACGTGCGACTCCAGAGTCCAGGCCAGTGATGCGTGCTGTGGCACAAGAACTGTCTTCGACTACAACTACACAGGCTTGTTTCTCCGAGCCATTTGGCATGATAACTATAAGCAAGCTTGCAGGGTTCCACAAA 486 0.4959 SDLEPRLADFGTAKLLSSDTSTWTSVAGSYGYMAPELAQTMRVSIKCDVYSFGVVTLEIMMGKHPGELLGTLSSNTCLWSTEEAQVLLKDVLDQRLPPPRGRLAKAVVLTVSIALACTRATPESRPVMRAVAQELSSTTTTQACFSEPFGMITISKLAGFHK 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16241g00001 162 PANTHER LEUCINE RICH REPEAT KINASE 2 1 141 - -
Mupr16241g00001 162 Gene3D Transferase(Phosphotransferase) domain 1 1 138 - -
Mupr16241g00001 162 Pfam Protein kinase domain 4 67 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16241g00001 162 SUPERFAMILY Protein kinase-like (PK-like) 2 141 IPR011009 -
Mupr16241g00001 162 ProSiteProfiles Protein kinase domain profile. 1 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16241g00001 Mupr-Chr16241 33 835 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16241g00001 2 139 Receptor kinase-like Gene Family AT5G49660 39.161 2.94e-23 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr16241g00001 Pkinase 2.5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16241g00001 - - gmx:100808600 264.618