Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1623g00001 ATGAGTGTTGATGGCGACAGTGAAGAGCTGAAAGAACTGGCTCAGCGCTTACGAGATGGGAAGAAGGTTGCTGGTGGGGATCATGGTTTATGCGAGGGTGATGAAGTGAAATGTAATGGAGTGGCTGAAGATGTTAAGGATGGACAGGGGGGGACTGTGGAATCCTCCTCAGTCCAGCAGCATATACCACAGCCTCAAGGGTCAATAATTTGTTGGGAGAGGTTTTTGCATGTTAGATCCCTTAAGGTATTGCTTGTGGAGAAAGATGACTCTACCCGCCATGTTGTCACTGCACTGCTTCGCAATTGTAGTTATGAAGTTATTGAAGCAGCAAGTGGATTGCAAGCTTGGAAGATATTGGAGGATTTAACCAATCATATTGATCTCGTTTTAACTGAGGTGGCAATGGCTGGCTTATCAGGCATTGGTCTTCTTTACAAGATTATGGGCCACAAAACCCGGAAAAATATTCCAGTAGTTATGATGTCGACTCATGATTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCTGTTGACTTTCTAGTTAAACCCATACGGAAGAATGAGCTTAAAAACCTGTGGCAGCATGTTTGGAGAAGATGTCACAGTTCTAGTGGGAGTGGCAGTGAAAGTGGCACACAAACCCAGAAGTCTGTAAAATCAAAGAGTCTTGAGAAGTCTGATAATAATTCTGGAAGCAATGATGAAGATAATAGTGGAAGTGTAGGCCTGAATAATGGTGATGGAAGTGACAATGGTAGTGGCACTCAGAGTTCATGGACCAAACGTGCTGTAGAAGTTGATAGTCCTAAACCAGTCTCCCAATGGGATCAAAGAGCCGAGTGCCCCGACAGTACCTGTGCTCAAGTTGTTCATCCCAATGCTGAAATAGGTGGGAACAAGGTGGTTCCTCTAGCTGCAATGGAGTGTCCAGAACAAAAGGAACAACTTGTCAAAACTGCAGGTTCTAAACATAGCAACGCACCTGATGTCAGCCCCTCTAAATTCAATGAGCAAATTAATAGAGGACAACTGGACCTTAATTGTGAAAATCAATCTAGCAAGCTAAGGTGTAAAGGATTATCATCGTTTGATGCCATTACTAGCACTTCTGATTCTCAGATGCATAGTGGAGAATTTGAGGCCCTAAATAGAAGACCCAAGTCATCAGATATTGAAAATAAAGGTACTGATAATGATGAAGAGTTGCCATCTCTTGAGCTCAGCTTAAAGAGGCTTAGAGGAGTGAAAGATGCTGGTATTACAATTCAGGATGAACGGAATGTTTTAAGGCGTTCTGATCAGTCTGCTTTCTCAAGGTATGCAGCTTCTAACACTAAGAAGTCTCCCACCGGATGTGTTGGAAGCAATTCTCCATATAATAATAGCTTAGAAGTTACAAAGAAAGATTCATCTCGTGATATTCAATCTCATTCTAGCGGCAATCCTCCTAACCAAAACTCAAATGGTGCTAGCAATAACAATGATATGGGTTCCACTACTAATAATGCTTATGCTAAATCTGCTGTTATAAGTGAGCCAGCAGTGGCATCAACAACTAAATGTTTGTACCAAACATCTGCTTTCCAGCCTATGAAAAATGACCTTGTTTATACCTCTCAACAAGTTGTCTTACATAGTACTGAAGATACAACAGCAACAATGCTGGCACCACCTAAAGTAGACAGACATAAAGATTCTGCAACTCAGGACTTCCATTGCCATCATGAAAACAATAAATGTATTGCTGACAACATGCAGCATCAGCTGTCACCTGATCATGATGCTGAATCTGTAAAGAAGATGGCTACTGCTGCTCCACATTGTGGGTCATCAAATGTGGTTGAAGTGCTAATTGAAGGTAATGTTGGAAACCACAGTATCAATAGAAGTGCTTCAGGCAGCAACAATGGAAGCAATAGACAAAATGGGAGAAGCACAATAGTTCATGCCGGAGGGACAAACATGGAAAGCAACAATGGACTCGCTGGGAATAGTGGCAGTGGTGATGCTAGCGGAAGTGGAAGTGCCAACAGAGTAGATCAAAACAAGACTTCTCAAAGGGAAGCAGCCTTAACTAAATTTCGCCAAAAGAGAAAAGAGAGAAAGGAGAGGTGCTTTCATAAAAAGGAATTATCAGAGTAA 2151 0.4198 MSVDGDSEELKELAQRLRDGKKVAGGDHGLCEGDEVKCNGVAEDVKDGQGGTVESSSVQQHIPQPQGSIICWERFLHVRSLKVLLVEKDDSTRHVVTALLRNCSYEVIEAASGLQAWKILEDLTNHIDLVLTEVAMAGLSGIGLLYKIMGHKTRKNIPVVMMSTHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSLEKSDNNSGSNDEDNSGSVGLNNGDGSDNGSGTQSSWTKRAVEVDSPKPVSQWDQRAECPDSTCAQVVHPNAEIGGNKVVPLAAMECPEQKEQLVKTAGSKHSNAPDVSPSKFNEQINRGQLDLNCENQSSKLRCKGLSSFDAITSTSDSQMHSGEFEALNRRPKSSDIENKGTDNDEELPSLELSLKRLRGVKDAGITIQDERNVLRRSDQSAFSRYAASNTKKSPTGCVGSNSPYNNSLEVTKKDSSRDIQSHSSGNPPNQNSNGASNNNDMGSTTNNAYAKSAVISEPAVASTTKCLYQTSAFQPMKNDLVYTSQQVVLHSTEDTTATMLAPPKVDRHKDSATQDFHCHHENNKCIADNMQHQLSPDHDAESVKKMATAAPHCGSSNVVEVLIEGNVGNHSINRSASGSNNGSNRQNGRSTIVHAGGTNMESNNGLAGNSGSGDASGSGSANRVDQNKTSQREAALTKFRQKRKERKERCFHKKELSE 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1623g00001 716 SUPERFAMILY CheY-like 79 205 IPR011006 -
Mupr1623g00001 716 MobiDBLite consensus disorder prediction 205 282 - -
Mupr1623g00001 716 Pfam Response regulator receiver domain 83 194 IPR001789 GO:0000160
Mupr1623g00001 716 Gene3D - 80 239 - -
Mupr1623g00001 716 SMART REC_2 81 196 IPR001789 GO:0000160
Mupr1623g00001 716 MobiDBLite consensus disorder prediction 628 716 - -
Mupr1623g00001 716 PANTHER TWO-COMPONENT RESPONSE REGULATOR 81 386 IPR045279 GO:0009736
Mupr1623g00001 716 MobiDBLite consensus disorder prediction 381 405 - -
Mupr1623g00001 716 MobiDBLite consensus disorder prediction 478 503 - -
Mupr1623g00001 716 ProSiteProfiles Response regulatory domain profile. 82 200 IPR001789 GO:0000160
Mupr1623g00001 716 MobiDBLite consensus disorder prediction 628 692 - -
Mupr1623g00001 716 FunFam Two-component response regulator-like PRR37 81 239 - -
Mupr1623g00001 716 MobiDBLite consensus disorder prediction 205 222 - -
Mupr1623g00001 716 MobiDBLite consensus disorder prediction 436 468 - -
Mupr1623g00001 716 MobiDBLite consensus disorder prediction 235 266 - -
Mupr1623g00001 716 Coils Coil 715 716 - -
Mupr1623g00001 716 CDD psREC_PRR 83 186 - -
Mupr1623g00001 716 MobiDBLite consensus disorder prediction 371 405 - -
Mupr1623g00001 716 MobiDBLite consensus disorder prediction 436 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1623g00001 Mupr-Chr1623 779 13779 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1623g00001 157 712 Response Regulator Gene Family AT5G02810 46.167 1.15e-97 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr1623g00001 Response_reg 2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1623g00001 K12129 - gmx:100806454 1163.67