Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16221g00002 ATGGCTTCCGATAATCCTTATGGAATGATGGACGATGAGGGGTTTGATTGGGAAGCAGCTGCTATAGAAATCGACGTGGTTTGCCAAATGACCAGTGACGCAAAGGGAAAGGTTCATGAGAAGAAGAGAAAGCAGCAAAATGCCAAGAAGGAAACCCCATTGCCGCGGTCCAAAGAAGATGACGAAGGCCCTACTTTCGTCCACCAAATTGACGCGGAGGCGGCCAAAACTTGGATATATCCAGTTAATGTTCCTCTTCGTGACTATCAATTTGATATTACCCAGTCCGCACTCTTTTCAAACACATTGGTGGCCTTGCCAACGGGACTTGGCAAAACACTCATTGCCGCCGTTGTTATGTATAACTACTTCAGATGGTTTCCTCAAGGCAAAATAGTCTTTGCTGCTCCTTCTCGGCCACTTGTCATGCAGCAGATCGAAGCATGCCACAATATTGTGGGCATACCTCAAGAATTGACAGTTGATATGACTGGTCAGCTAAGTCCTCCCAAAAGAGCTCGATTTTGGAAAACAAAACGAGTTTTCTTCGTCACTCCACAAGTGTTGGAAAAGGATATTCATTCTGGTACATGTTTGGTGAAGTACTTGGTATGTTTGGTGATTGATGAAGCTCACAGAGCAATGGGAAATTACGCTTATTGTGAAGCAGTTCGTGAGTTAATGGCTGTACCAGTACAGCTGAGAATATTAGCATTAACTGCAACACCTGGATCAAAGCAGCAGACAGTCCAGTCTGTCATTGATAATCTGCATATCTCCAGACTTGAATATCGCAGTGAAACTGATCATGATGTTATCTCATATGTTCACAATAGGCAGATAGAGTTGATACAGGTTGCAATGGGCCCAGATGCTGTAGAAATAAACAATAAGTTTATGGAAGTAATACGCCCTATAGTAGCCAGGCTTACAAATAGTGGAGTCATTCAGAATAGAGACTACCGCACTTTGAGCCCTTGTCAGTTACTTGAAATAAGGGAAAAGTTTCGTCAGCAGCCTAGGCAAGATCTTTCTCATGTCAACTATGAAGATGTTGAAGGGTATTTTGGAGTTCTAATTACTCTTTATTACATCCATAAGCTACTCTCAAGTCACGGAATAAGGCCAGCATATGAGATGCTCGAGAGAAAATTGAAGCAAGGATATTTTGCAAAATTTATGAGTAAAAATGAAGTTATTCTGAAAGGAAAGCAACTAATGCAGCAAAGTCTGTCTCATGGAGCATCGAGTCCAAAGTTGTCCAAAATGCTCGAAGTATTACTGGAGCATTTCAAAACCAATGATCCTCAAAACTCCAGAGTAATTATCTTCTCCAATTACCGAGAAAGTGTCAGGGATATAATGGATGCACTTGGAGATATTGGGGAGTTTATTAGAGCTACCGAGTTTATTGGTCAAAGTTCAGATACGAAAATGCCTTTCTTGGAGTGGGACACTTCAATTCCTAGAAAATATTTCAGCCTCCCAAGAATGTTGACTCAAGACTTGTTGCTCCTTCCAATCATCACCGGGAAAACAATGAAAGGTCAGTCCCAAAAAGTTCAACAGGCTGTGCTGAAGAAATTTCGGTCTGGTGCCTATAATGTCATTGTTGCTACGTCAATTGGTGAAGAAGGTCTTGATATCATGGAAGTTGATCTTGTCATATCTTTTGATGCTAATATTTCACCACTTAGAATGATTCAGCGAATGGGGAGAACTGGAAGAAAGCATGATGGACGAATTCCCCATGTCCTTAAACCAGAAGTTCAATATGTTGAGCTGTCCATTGAGAAATTTATTCCTCGTCAAAAGAATGTGAAAGATGATGAAGTCCACATTTCTCCATCAAAGGACAAACTCACTGTTGCTGAAATTGATTTACTTGAAACATATTTTAACCCTACTGAGGAAAACAATTGTAGAATGTCTCTTATTGCCTTTCCCCACTTTCAGACCTTTCCTTCTAGAGTGCATAAAGTGAAGCATTCCTCTGGAACATTGATGCTTATAGACATGATGCAGCGTTTGCAAGGACTAGTATCGTCTACAGAAGATGACAAAACTTCCTTACTTCAGGAAGGTCTTTATTTGGGACATAGTAAGCCAGTTGCCACGATCAAACTTGATGAACCTAAAAATGACAACAAATCATGCTCTAGGCATACAATGAAAAGGAATGTAATCTCTGTTAATTGTCTGGAGCTGGATTCATGTCATTTGGGGATTCAAAGTGAAGACTTCGTTGATCTAACTCTAGAAGATGGTACTTTCTGTGACTTGGGTAAGAATCAAGAAGAAACATGTGAGGGTGATGAGACAATTCCTGAGACTCCAATTGCTAAGAGAAGTGTCTCAAATGAAGGTGATAATTCTGGTCATATGGTAAATCTTATCGAGATTGAGACTTCCTCGTTGATTGCAGATGCATGCATTAATGGCATGAGAGACGAAGAACTTAGCCCTCGTTTAACTAATTTTATTAAAAGTGGTGTTGTTCCAGAGTCTCCCATTGATGAAAGAGGGAAATCAAGATGCAATTCTGTCATATGCGACTGTATGTTACCTGTTCATCTCCACGAAGAACAGGATGTTAGTTCTTTAAGCTCTAAGGAAACTGAAAAGGTCATTATTGATAGGAACACTGATACGAATGTCTGTACTTCCCCTGTTGTTAATGAAACTCAAACCCCTTTACTTGAGCTGAAGAATTGTGCAATTAGAAGACGACAAGTCTTCCTTTCTCAAACTGAGGAAGGCCATACACATAACACTGACCCAAGCTTCAGTGAAGAAGCACTTCCAGATTGTGGTGAAATGTCTGAAAGCATTAAACCTGCACACAAATTTAAAAGGTTGCGGAAAGCTGATGACTCTGAAAGTAATATGAATCAGAAAAACAATAGACTTTTTGCTTCAACAGCAAACTTTCTCAAATCATCTTCTGCCTCCAATCCCCCACAATATAAACATAGCCAAGGTAAAAGGAAATCAACACACAGTGTGAGAGACTTCATTGAGGAGGAAGCTGAGGTATCTTCAGATGCATATGTCTCTAATGATGAAGATGACGAGGATGGCAATTCATTTGACAGTTTCATAGATGACAGGACCAACCCTACAGCAGCCAGTCAACCTGAAGCTAGTAGAATGGACATGATGGCAATTTACAGGCATTCTTTGCTCAGTCAAACACCGAGTAATGGAGGGGTTGATTTTTCTGCCACTTTCACTCCCGACCGTGTGACTATGGCAGCCAGTATTAATGAAAGTGGGGATTCTTCAGGGAAGACAGTCAATCATTTCCATACAGAGCCAACCAAACAGTCAGCCAATCGGACTTTGGAATCTGTTAGTATTGACCAGATAACCTCAGAAGCAGTGCCTTCAACATGTTCTCCTACGGGAACTGGGACAGAGATAAGAATTCGCAAACGAAGATTGGCATTTTACCATTCTGGACACTTCCCAAATATGAACCTTGAGCGAGAATTTGCACTTCAATCAAAGAAAGCGGTGGATGCCGATGCAACTAAAGATGTTCTATGTGATGATCAATTTTATAATGACCTTGATCTCGACGAGTTGGAGGCACAAGCAACTTTGCTTCTAAAACGGAAATTATTGTCAACTCAGAAGCAAGATACGGTTCAGCGCGAGGGGTAG 3666 0.4086 MASDNPYGMMDDEGFDWEAAAIEIDVVCQMTSDAKGKVHEKKRKQQNAKKETPLPRSKEDDEGPTFVHQIDAEAAKTWIYPVNVPLRDYQFDITQSALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPQGKIVFAAPSRPLVMQQIEACHNIVGIPQELTVDMTGQLSPPKRARFWKTKRVFFVTPQVLEKDIHSGTCLVKYLVCLVIDEAHRAMGNYAYCEAVRELMAVPVQLRILALTATPGSKQQTVQSVIDNLHISRLEYRSETDHDVISYVHNRQIELIQVAMGPDAVEINNKFMEVIRPIVARLTNSGVIQNRDYRTLSPCQLLEIREKFRQQPRQDLSHVNYEDVEGYFGVLITLYYIHKLLSSHGIRPAYEMLERKLKQGYFAKFMSKNEVILKGKQLMQQSLSHGASSPKLSKMLEVLLEHFKTNDPQNSRVIIFSNYRESVRDIMDALGDIGEFIRATEFIGQSSDTKMPFLEWDTSIPRKYFSLPRMLTQDLLLLPIITGKTMKGQSQKVQQAVLKKFRSGAYNVIVATSIGEEGLDIMEVDLVISFDANISPLRMIQRMGRTGRKHDGRIPHVLKPEVQYVELSIEKFIPRQKNVKDDEVHISPSKDKLTVAEIDLLETYFNPTEENNCRMSLIAFPHFQTFPSRVHKVKHSSGTLMLIDMMQRLQGLVSSTEDDKTSLLQEGLYLGHSKPVATIKLDEPKNDNKSCSRHTMKRNVISVNCLELDSCHLGIQSEDFVDLTLEDGTFCDLGKNQEETCEGDETIPETPIAKRSVSNEGDNSGHMVNLIEIETSSLIADACINGMRDEELSPRLTNFIKSGVVPESPIDERGKSRCNSVICDCMLPVHLHEEQDVSSLSSKETEKVIIDRNTDTNVCTSPVVNETQTPLLELKNCAIRRRQVFLSQTEEGHTHNTDPSFSEEALPDCGEMSESIKPAHKFKRLRKADDSESNMNQKNNRLFASTANFLKSSSASNPPQYKHSQGKRKSTHSVRDFIEEEAEVSSDAYVSNDEDDEDGNSFDSFIDDRTNPTAASQPEASRMDMMAIYRHSLLSQTPSNGGVDFSATFTPDRVTMAASINESGDSSGKTVNHFHTEPTKQSANRTLESVSIDQITSEAVPSTCSPTGTGTEIRIRKRRLAFYHSGHFPNMNLEREFALQSKKAVDADATKDVLCDDQFYNDLDLDELEAQATLLLKRKLLSTQKQDTVQREG 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16221g00002 1221 MobiDBLite consensus disorder prediction 1014 1030 - -
Mupr16221g00002 1221 SMART helicmild6 493 578 IPR001650 -
Mupr16221g00002 1221 SMART ultradead3 82 282 IPR014001 -
Mupr16221g00002 1221 Gene3D - 82 276 IPR027417 -
Mupr16221g00002 1221 MobiDBLite consensus disorder prediction 979 1048 - -
Mupr16221g00002 1221 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 582 IPR027417 -
Mupr16221g00002 1221 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 93 261 IPR014001 -
Mupr16221g00002 1221 Pfam Type III restriction enzyme, res subunit 99 243 IPR006935 GO:0003677|GO:0005524|GO:0016787
Mupr16221g00002 1221 CDD DEXDc_FANCM 84 265 IPR044749 GO:0005524
Mupr16221g00002 1221 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 11 582 - -
Mupr16221g00002 1221 Pfam Helicase conserved C-terminal domain 511 577 IPR001650 -
Mupr16221g00002 1221 CDD FANCM_ID 293 407 IPR039686 GO:0006281|GO:0043138
Mupr16221g00002 1221 MobiDBLite consensus disorder prediction 942 962 - -
Mupr16221g00002 1221 FunFam Fanconi anemia, complementation group M 81 276 - -
Mupr16221g00002 1221 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 419 620 IPR001650 -
Mupr16221g00002 1221 MobiDBLite consensus disorder prediction 916 965 - -
Mupr16221g00002 1221 Gene3D - 407 603 IPR027417 -
Mupr16221g00002 1221 CDD SF2_C_FANCM_Hef 417 582 - -
Mupr16221g00002 1221 MobiDBLite consensus disorder prediction 35 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16221g00002 Mupr-Chr16221 12911 31279 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16221g00002 519 576 Eukaryotic Initiation Factors Gene Family AT3G13920 36.207 1.19e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16221g00002 K10896 - gmx:100820078 1764.59