Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16217g00001 ATGCTAAGCTTTCTTCACTGTTATTTATTACGGAGAAAAACAAGAAGGAGAAATTATAAGATTCTTCTAAAAGAAAATTGTACTGTCACCCTGGAGGGGCTGCAATTTGATTTGGCTATAATTAAAGCAGCAACAAATAATTTTTCGCATGAAAACAAGATTGGCAAAGGTGGATTTGGAGAAGTTTACAAGGGCATTTTTCCTTGTGGACGACATGTAGCTATCAAAAGATTATCAACAAGTTCAAGACAAGGTTCAGCTGAATTCAAAAATGAAATTTTACTAATAGCCAGACTACAACATAGAAATCTCGTGGAGTTAATAGGTTTTTGCCTAGAAGTGGAAGAAAAGATTCTAATCTACGAATACATGCCGAATGGAAGTCTTGATAACTTTTTATTTGATACTCAACAAAATAAGTTAAGTTGGTATCAGCGTTACAAAATTATAGAAGGAATTGCTCGAGGAATTCTTTATTTACATGAATATTCTCGACTTAAAGTTATACACCGTGATCTCAAGCCTAGTAATATACTTTTAGATGAAAATATGAATCCGAAGATATCAGATTTTGGTATGGCTAAAATTGTTGAAATAAATCAAGATCGTGGAAAAACCAAACGAATAGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGTTGGGCCAATTTTCTGAAAAGTCAGATATTATTACAGGAAAAAGGAACATAAATTCTCATGAATTGTACCATATGGCAGATGGTCTCCTGAGCTATGTTTGGAGACAATGGAAGGACCAAACACCATTGAGCATATTGGACCCAAACTTGGAAGAAATTTGTTCAGAAGTTGAAGTCATTAAGTGTATTCATATTGGTTTACTATGTGTTCAAGAAAATAAAATTGTTAGACCTTCCATGGCAAAAGTTATTTCATATCTTGATGGTCACATACTTGAATTGCCATCTCCTCAAGAACCAGCCTTTTTCTTACAAGATAGAGTGAATAAAAAAATAGGTACACAACATTTATCTATTAATGAGATGTCCATAAGTACATTTTGTGCTCGATAA 1059 0.3314 MLSFLHCYLLRRKTRRRNYKILLKENCTVTLEGLQFDLAIIKAATNNFSHENKIGKGGFGEVYKGIFPCGRHVAIKRLSTSSRQGSAEFKNEILLIARLQHRNLVELIGFCLEVEEKILIYEYMPNGSLDNFLFDTQQNKLSWYQRYKIIEGIARGILYLHEYSRLKVIHRDLKPSNILLDENMNPKISDFGMAKIVEINQDRGKTKRIVGTYGYMSPEYAMLGQFSEKSDIITGKRNINSHELYHMADGLLSYVWRQWKDQTPLSILDPNLEEICSEVEVIKCIHIGLLCVQENKIVRPSMAKVISYLDGHILELPSPQEPAFFLQDRVNKKIGTQHLSINEMSISTFCAR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16217g00001 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Mupr16217g00001 352 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 5 333 - -
Mupr16217g00001 352 SUPERFAMILY Protein kinase-like (PK-like) 34 328 IPR011009 -
Mupr16217g00001 352 Gene3D Phosphorylase Kinase; domain 1 10 123 - -
Mupr16217g00001 352 Gene3D Transferase(Phosphotransferase) domain 1 124 316 - -
Mupr16217g00001 352 CDD STKc_IRAK 54 311 - -
Mupr16217g00001 352 SMART serkin_6 48 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16217g00001 352 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Mupr16217g00001 352 Pfam Protein kinase domain 49 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16217g00001 352 ProSiteProfiles Protein kinase domain profile. 48 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16217g00001 352 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 11 123 - -
Mupr16217g00001 352 FunFam Lectin-domain containing receptor kinase A4.3 124 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16217g00001 Mupr-Chr16217 2184 3865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16217g00001 6 329 Receptor kinase-like Gene Family AT4G23150 52.537 8.23e-125 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr16217g00001 Pkinase 4.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16217g00001 - - gsj:114402116 559.681