Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16215g00001 ATGGATAGGCCTGACCCAGATGGACTTATAGTGAAATCGACGGGCCCAGATCGAGCCTCGGAGGAGAGAATCGCAGCAAGGTCCGCTATGTTTACGTTTCTGAATTTTACTACCGTTGATTTTGTAGTTAATGCTTACGTGTGGTGTTTTATGCAGCCGAAGCAAATTCATGAGATCAAGGACTTCCTCCTGACTGCAAGGAGGAAGGATGCACGCTCTGTGAAAATCAAGCGGAGCAAAGATGTGGTGAAGTTCAAGGTCCGTTGCTCCAAGTACCTGTACACCCTGTGTGTGTTTGATTCTGAGAAGGCTGACAAGTTGAAGCAATCACTTCCTCCAGGACGTGTGATTCTGACTGGTGTTGATGAAGATCAGCTCTGTAGATAA 387 0.4677 MDRPDPDGLIVKSTGPDRASEERIAARSAMFTFLNFTTVDFVVNAYVWCFMQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGRVILTGVDEDQLCR 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16215g00001 128 FunFam 60S ribosomal protein L38 52 119 - -
Mupr16215g00001 128 Gene3D - 52 118 IPR038464 -
Mupr16215g00001 128 PANTHER 60S RIBOSOMAL PROTEIN L38 53 114 IPR002675 GO:0003735|GO:0005840|GO:0006412
Mupr16215g00001 128 Pfam Ribosomal L38e protein family 53 114 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16215g00001 Mupr-Chr16215 501 2664 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16215g00001 53 114 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 95.161 1.96e-38 122