Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16205g00001 ATGGAGCTTCAACTGGGTCTCGCTCTCTCTACCAATCCCTCAAAACTCCTCGACCTCAATTCTCGTTCCTACCATCCTCACAACAAACGTAGCTTCTCCCACCTCTTGGACCATGACACACATGCTATGCTTCCTACTCTCTCTCTCCTCCCTTTAACGCCAAACCACCATGATGATCACCACCTCACCCACTCCTCTAACATCACCAAGAGTGATGACGAGGAGGGTCTAGTGGGTTGGCCCCCCGTAAACTATTGGAGGAAGAAACTTCGTGTCGATAACTTGGGAGACGACCTTGTAGGGAACAATGATCACGTGGTATGGGATGCTCATGCTCATGCTCATGCTCATGCTCATGCTCATGCTCATGCTCATGCTCATGCTCATGCTCATGCTCATGCTCATGCTCATGGCATACGAGCATCCAATACTCTGTACGTCAAGGTGAAGATGGAGGGTGTGGGAATTGCACGGAAGGTTGATCTCCGCATGCACCAATCGTTTCACACGCTCAAGGAAACCTTGATGGACATGTTTGGAAAATCTCATCAACAATCAAACAGCTATGAATTGGCTTATCAGGACAAAGAAGGTGATTGGCTTCTCGCACAAGATGTACCATGGAGGCAAGTGCATCCTACCTATCACCTTTATAATTCTCAACCAAATCAAAACCCTATCAATTCAACTCCTTCCACTTATAATTATAATAATTGGGATTTTTCTACCCGTTATAGAAGTTTCGTTGAGTGTGCACGACGACTCAAATTGCTGAAGAGCAGCGGATAA 789 0.4639 MELQLGLALSTNPSKLLDLNSRSYHPHNKRSFSHLLDHDTHAMLPTLSLLPLTPNHHDDHHLTHSSNITKSDDEEGLVGWPPVNYWRKKLRVDNLGDDLVGNNDHVVWDAHAHAHAHAHAHAHAHAHAHAHAHAHAHGIRASNTLYVKVKMEGVGIARKVDLRMHQSFHTLKETLMDMFGKSHQQSNSYELAYQDKEGDWLLAQDVPWRQVHPTYHLYNSQPNQNPINSTPSTYNYNNWDFSTRYRSFVECARRLKLLKSSG 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16205g00001 262 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 2 261 IPR003311 GO:0005634|GO:0006355
Mupr16205g00001 262 ProSiteProfiles PB1 domain profile. 144 232 IPR000270 GO:0005515
Mupr16205g00001 262 Gene3D - 139 224 - -
Mupr16205g00001 262 SUPERFAMILY CAD & PB1 domains 137 214 - -
Mupr16205g00001 262 Pfam AUX/IAA family 185 209 IPR033389 -
Mupr16205g00001 262 Pfam AUX/IAA family 28 181 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16205g00001 Mupr-Chr16205 1786 2894 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16205g00001 95 246 B3 DNA Binding Superfamily AT3G61830 24.074 1.91e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr16205g00001 AUX_IAA 4.9e-17 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16205g00001 K14484 - gmx:100808466 219.935