Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16198g00002 ATGAGGTTCTCAGTGCTGCTACTTTTGTTTTGTCTTGTGTTTTTGCTCTCAAAGCCAACAATGGTGTGTGGGAATGGAGAGCTAAGAGCACTGATGGATATGAAAGCCAGTTTGGATCCAGAGAGCCGTTACCTACCCTCTTGGAGTATCAATGGTGACCCATGTGATGGATCTTTTGAAGGAGTAGCATGCAATGAGAAGGGTCAGGTGGCTAACATTTCTCTGCAGGGAAAGGGTCTCTCAGGGAAGCTTTCACCAGCCATTGCTGGTCTCAAGCACTTGACTGGACTCTACTTGCATTATAACTCTTTGTATGGAGAGATACCAAGCCAAATTGCAAACTTGACTGACCTTGTTGATTTGTATTTGAACGTAAATCATTTGACTGGGGAAATCCCACGTGAGATCGCAAGCATGGAGAACTTGCAAGTTTTGCAGCTTTGTTATAATCACTTGACAGGAAGCATTCCTACACAGCTTGGTGGTTTGAAAAAGCTAGGTGTTGTTGCTTTGCAGTCAAACCAGTTAACTGGTGCTATCCCTGCTAGTCTAGGTGATTTGGGTATGCTGGTGAGGCTAGATTTGAGCTCTAATAATCTCTTTGGCTCCATTCCCACTAGCCTAGCTGATGCTCCTTCACTCAAAGTTTTGGATGTTCACAACAATACCCTTTCTGGGAATGTACCTCCTGCACTCAAGAGACTAGATGATGGATTTCTGTATGAATACAATCTGGGGTTATGTGGAGTTGGGTTTTCATCCCTTAAAGCTTGCAACGCTTCGGATCATGTCAATCCTAGCAGACCTGAACCTTATGGAGCATCCACAAGAGATATCCCAGAAACTGCAAATGTGAAGTTACCTTGCAACGGAACACGGTGCCTTAACTCATCAAAATCAAATCATTCCACATCAATTACTGTTGGCATATTTGTGGTTATAATTGCACTCTCTGCAATTGGTATTTTGACATTCACATTATACCGTCGGAGAAAGCAAAAGCTTGGAGGTTCTTTTCATATCAGTGACAGCCATCAAAGTACTGATGAGGTCATGGGTGCATATAGGAAAAATGGATCTCCTTTGGTCAGCCTTGAGTACTCTACTGGATGGGACCCTTTGGCCGATAGTAGGAATTTCAATGGGTATAGCCAAGATATGTTCCAGAGTTTAAGGTTCAACTTGGAAGAAGTGGAGTCAGCTACTCAGTATTTCTCTGAGTTGAATCTGTTGGGTAAGAATAGCTTTAGTGCAACATATAAAGGACTTTTAAGAGATGGATCCATTGTTGCTGTGAAGAGCATCAGTAAAACTAGTTGCAAGTCGGATGAAGCTGAGTTTATGAAGGGATTGAACATGTTGACCTCACTGAGGAATGATAATGTAGTGAAGTTGAGAGGATTTTGTTGTTCAAGGGGAAGAGGTGAATGCTTTCTGATTTATGATTTTGTTTCAAATGGAAGCCTTTCACGCTTCCTTGATGTTAAGGAAGGAGATGGAGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAAGGGATTGCTAAAGGTATGGCATATTTACATGCATACAAAGCAAACAAACCCGTTGTGGTTCACCAAAACATCTCTGCTGACAAAGTTCTAATTGATCAGCGCTACAATCCATTGCTGGCAGATTCTGGGCTGTACAAGCTTCTTACTAATGATATTGTCTTCTCTGCACTCAAGGGTAGTGCAGCAAAGGGTTATCTGGCTCCTGAATACGCCACTACTGGCCGCTTTGCCGAGACAAGTGATGTTTATGCTTTTGGGGTGCTGCTTTTCCAAATTCTTTCAGGGAAGCACCACATCACTACCTCAATAAGGCTTGCTGCAGAGTCCTCCAAATTCCAACAATTTATTGACCCAAATCTCAATGGAAGATTCTTTGAATATGAAGCAGCTAAACTGGCAAAAATAGCTTTGCTTTGCTCCCATGACTCTCCTTTTGAGAGGCCATCCATGGTAACCATTGTTCAAGAGCTGGCAAATTTACTC 2022 0.4243 MRFSVLLLLFCLVFLLSKPTMVCGNGELRALMDMKASLDPESRYLPSWSINGDPCDGSFEGVACNEKGQVANISLQGKGLSGKLSPAIAGLKHLTGLYLHYNSLYGEIPSQIANLTDLVDLYLNVNHLTGEIPREIASMENLQVLQLCYNHLTGSIPTQLGGLKKLGVVALQSNQLTGAIPASLGDLGMLVRLDLSSNNLFGSIPTSLADAPSLKVLDVHNNTLSGNVPPALKRLDDGFLYEYNLGLCGVGFSSLKACNASDHVNPSRPEPYGASTRDIPETANVKLPCNGTRCLNSSKSNHSTSITVGIFVVIIALSAIGILTFTLYRRRKQKLGGSFHISDSHQSTDEVMGAYRKNGSPLVSLEYSTGWDPLADSRNFNGYSQDMFQSLRFNLEEVESATQYFSELNLLGKNSFSATYKGLLRDGSIVAVKSISKTSCKSDEAEFMKGLNMLTSLRNDNVVKLRGFCCSRGRGECFLIYDFVSNGSLSRFLDVKEGDGEVLEWSTRVSIVKGIAKGMAYLHAYKANKPVVVHQNISADKVLIDQRYNPLLADSGLYKLLTNDIVFSALKGSAAKGYLAPEYATTGRFAETSDVYAFGVLLFQILSGKHHITTSIRLAAESSKFQQFIDPNLNGRFFEYEAAKLAKIALLCSHDSPFERPSMVTIVQELANLL 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16198g00002 674 SUPERFAMILY L domain-like 23 233 - -
Mupr16198g00002 674 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 300 671 - -
Mupr16198g00002 674 FunFam Protein NSP-INTERACTING KINASE 2 137 259 - -
Mupr16198g00002 674 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Mupr16198g00002 674 Gene3D Ribonuclease Inhibitor 139 258 IPR032675 -
Mupr16198g00002 674 SUPERFAMILY Protein kinase-like (PK-like) 380 670 IPR011009 -
Mupr16198g00002 674 Gene3D Transferase(Phosphotransferase) domain 1 484 674 - -
Mupr16198g00002 674 FunFam Leucine-rich repeat receptor-like kinase 26 134 - -
Mupr16198g00002 674 Pfam Leucine rich repeat 141 200 IPR001611 GO:0005515
Mupr16198g00002 674 Pfam Protein tyrosine and serine/threonine kinase 409 670 IPR001245 GO:0004672|GO:0006468
Mupr16198g00002 674 Gene3D Ribonuclease Inhibitor 26 138 IPR032675 -
Mupr16198g00002 674 FunFam Protein NSP-INTERACTING KINASE 2 484 674 - -
Mupr16198g00002 674 FunFam Protein NSP-INTERACTING KINASE 2 376 483 - -
Mupr16198g00002 674 Gene3D Phosphorylase Kinase; domain 1 375 483 - -
Mupr16198g00002 674 ProSiteProfiles Protein kinase domain profile. 405 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16198g00002 Mupr-Chr16198 11404 14139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16198g00002 8 518 Miscellaneous Gene Families AT4G22730 56.000 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Mupr16198g00002 PK_Tyr_Ser-Thr 9.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16198g00002 - - gmx:100775422 1214.52