Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16198g00001 ATGGCTTCCCTGGCCGCTTCCACCGCGGCTATGTCAGAAATGCTCGGAAACCCCGTGAGCCTGAGAGGAGCCACCAGGTCTGCTCCATCACNNNNNNNNNNNNNACCTCCAAAGAAAAAGCCTGCTTCTTTCTCCCCCGCCAATGAGGAACTCGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCAGAGGGTCTCTTGGACCGATCAGAGATCCCCGAGTACTTGACTGGAGAAGTGCCTGGAGATTATGGTTATGACCCATTTGGTCTTAGCAAGAAGCCAGAGGACTTTGCCAAATACCAGGCGTTTGAGTTGATTCATGCCAGATGGGCGATGCTTGGTGCTGCTGGATTCATTATTCCTGAGGCCTTTAACAAATACGGAGCTAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACCGGAGCTTTGCTTCTTGATGGGGGTACGTTGAACTACTTCGGGAAACCTATCCCCATCAATCTTATTGTTGCTGTTATTGCTGAGATAGTTCTTGTGGGTGGTGCAGAGTACTACAGAATTATTAATGGCCTGGATTTCGAAGACAAGCTTCACCCAGGTGGTCCATTCGATCCATTGGGGCTAGCAAAGGATCCAGACCAAGCTGCACTGCTAAAGGTGAAGGAAATTAAGAATGGTAGACTTGCTATGTTTGCAATGCTTGGTTTCTACTTCCAAGCTTATGTCACTGGAGAAGGTCCAGTTGAGAACTTAGCAAAACATCTCAGTGACCCTTTTGGCAACAACTTGCTCACTGTCATTGGTGGATCCGTTGAGAGGGCTGCAACTCTCTGA 819 0.4823 MASLAASTAAMSEMLGNPVSLRGATRSAPSXXXXXPPKKKPASFSPANEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVIAEIVLVGGAEYYRIINGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIGGSVERAATL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16198g00001 272 FunFam Chlorophyll a-b binding protein, chloroplastic 61 272 - -
Mupr16198g00001 272 MobiDBLite consensus disorder prediction 17 44 - -
Mupr16198g00001 272 SUPERFAMILY Chlorophyll a-b binding protein 53 262 - -
Mupr16198g00001 272 Gene3D Chlorophyll a/b binding protein domain 61 272 - -
Mupr16198g00001 272 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 26 261 IPR001344 GO:0009765|GO:0016020
Mupr16198g00001 272 Pfam Chlorophyll A-B binding protein 74 235 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16198g00001 Mupr-Chr16198 484 2997 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16198g00001 1 272 Chloroplast and Mitochondria Gene Families AT4G10340 76.491 5.10e-146 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16198g00001 K08916 - gmx:100817348 499.59