Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16191g00002 ATGGAGAGCACCGACTCATCAACCGGTTCGCAACAACCGCACCTGCCGCCGGGGTTCCGGTTCCACCCCACCGACGAGGAGCTCGTGGTTCACTACCTCAAGAAAAAAGCAGCTTCTGCTCCTCTCCCAGTAGCCATAATCGCCGAGGTTGATCTCTACAAGTTCGATCCGTGGGAGCTACCCGCTAAGGCAACGTTTGGAGAGCAGGAGTGGTATTTTTTTAGTCCGAGGGACAGGAAGTATCCGAACGGCGCGAGGCCAAACAGGGCGGCCACATCTGGGTATTGGAAGGCCACGGGGACTGATAAGCCTGTGTTGACCTCTGGTGGAACCCAAAAGGTTGGGGTGAAGAAGGCCTTGGTTTTCTATGGAGGGAAGCCCCCAAGAGGGATCAAAACCAATTGGATTATGCATGAGTATAGGCTTGTTGATAACAAGCCTAACAATAGGCCTCCTGGCTGTGACTTGGGCAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTGCTGTGCCGAATCTACAAGAAGAGCAACACGCATAGGTCTCCCGTGGAGCATGATAGGGAAGACTCAATGGATGAGATTTTAGGAGGGATTCCTCCTTCCATCAACGTGAGCCACATGAGTTCGAGGTTTCATCTTTCAAAGATGTCCACGAGCTACAACGGTGCATTGTTGGAAAATGATCACCAGAATGTGTTGGAAGGGATGATGATAGGCAACGGAGTGATGAACACAACTACTACTACTACTATGCCTGTTGCCATGTCATCCCAGTTGGGGGCTTCAAACTCCAAGGCAGAGCTTTCGTTTGTGCCAACCATGACTCACTCTTCAAACACTTCTAAAAGAACACTCTCGTCGCTGTACTGGAACGATGAGGATGTGGCTGGAACCTCATCATCGAACAAGAGGTTCAATTTGGAAAGTGGGGACAACAATCATGGAAGTGTTGTGAGGACTGATCAAGAGAATGGCACTGCTACCTCTTTTGCCACTCTGCTTAACCAGCTCCCTCAAACACCTTCGTTGCACCAGCAATCAATGCTGGGATCAATAGGTGATGGACTACTTAGGACAACATATCAAATACCAGGAATGAATTGGTATGCTTAG 1116 0.4937 MESTDSSTGSQQPHLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLVDNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPVEHDREDSMDEILGGIPPSINVSHMSSRFHLSKMSTSYNGALLENDHQNVLEGMMIGNGVMNTTTTTTMPVAMSSQLGASNSKAELSFVPTMTHSSNTSKRTLSSLYWNDEDVAGTSSSNKRFNLESGDNNHGSVVRTDQENGTATSFATLLNQLPQTPSLHQQSMLGSIGDGLLRTTYQIPGMNWYA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16191g00002 371 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Mupr16191g00002 371 MobiDBLite consensus disorder prediction 1 20 - -
Mupr16191g00002 371 MobiDBLite consensus disorder prediction 298 321 - -
Mupr16191g00002 371 FunFam NAC transcription factor 56 24 181 - -
Mupr16191g00002 371 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Mupr16191g00002 371 PANTHER NAC TRANSCRIPTION FACTOR 56 15 215 - -
Mupr16191g00002 371 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Mupr16191g00002 371 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16191g00002 Mupr-Chr16191 11668 13388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16191g00002 1 371 NAC Transcription Factor Family AT3G15510 54.948 1.17e-129 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr16191g00002 NAM 1.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16191g00002 - - gmx:100170710 660.603