Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16187g00002 ATGCATTCCTGCAGATTTTCAGCACTGCTAATTCCAATTATCTTATCCATCATCACACTCGTCAAAGATGCCACTGCTACATATATATCTTACCCGCCGCCACCACCTTATTATAACTGTTCAAGCAGAAGCACATACGCACCCAATAGCACCTTCCAAACCAACCTGGAAACTGTTTTGTCATGGCTTTCCTCCAACGCCACAACCACTGCTCAAATCTACAACACCTCCGTTACAGACAACAACGATTCCTCCAACACTGTCTATGGCTTCTTCACGTGCGGCCTATTCATGATCAGAGTTGAAGACGGGAAACAAAGCTGCAAGGAGTGCGTGACAAACTTAACCACGGCAGTTCCAAAACTGTGTCCCGTGGCAAAAGAAGCCATACTCTGGGCTGACAATTGCTTCGTGCATTACTCGAATCGTTATTTCTTGAGCACAGTGGAAGAGAGTCCAAAACTTGTGTTCGTGAACGAGCAGGACTATGTGGGACAGGTTGGCCACTTCAACAGCATACTCTGGGATACCATGAACGATGTAAGAAATCGAACAGCAAATGCCCCCATTGGGTCTGCCAGGTATGACTACAAGTCGGTGAACACCACAGCTAACGAAACGCTATATGTAATGGAATGGTGCATACCTTACCTTTCCTCGGACAACTGCAGGTGGTGTCTCGGCGATGCCATAGCAGAAATTCCAACCACCTGTTGTAGAGGAAAAACTGGAGGGAGAGTTATTTACCCCAGTTGTTCTGTTAGATATGAATTATATCCATTTTACCATCTACTCACTTCGGACACACCACCATCAGTTGGGGATGAAGTTGCTATTTTGGAATCCTTGTGGTTTGACTTTGCCGAAATTGAGTCTGCAACAAACAAGTTTGCTAAAGAAAATATGATTGGAAAAGGTGGATTTGGAGAAGTTTATAAGGGTGTACTTTCAAATGGACAAGAGATAGCTGTGAAGAGGCTTTTGGGAAGCTCCGGGCAAGGGGAAGTAGAATTTAAGAATGAGATTATCAAAGGAATTGCACGAGGAATTCTTTATCTTCATGAAGATTCTCGCCTTAAAATTATACACCGTGATCTCAAACCTAGTAATGTTTTGTTAGACAGTAACATGAATCCAAAAATTTCAGATTTTGGTATAGCAAGAATTGTTGCTACTGATAATATGGAAGAAAATACACACCGAATTGTTGGAACTTAG 1218 0.4278 MHSCRFSALLIPIILSIITLVKDATATYISYPPPPPYYNCSSRSTYAPNSTFQTNLETVLSWLSSNATTTAQIYNTSVTDNNDSSNTVYGFFTCGLFMIRVEDGKQSCKECVTNLTTAVPKLCPVAKEAILWADNCFVHYSNRYFLSTVEESPKLVFVNEQDYVGQVGHFNSILWDTMNDVRNRTANAPIGSARYDYKSVNTTANETLYVMEWCIPYLSSDNCRWCLGDAIAEIPTTCCRGKTGGRVIYPSCSVRYELYPFYHLLTSDTPPSVGDEVAILESLWFDFAEIESATNKFAKENMIGKGGFGEVYKGVLSNGQEIAVKRLLGSSGQGEVEFKNEIIKGIARGILYLHEDSRLKIIHRDLKPSNVLLDSNMNPKISDFGIARIVATDNMEENTHRIVGT 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16187g00002 405 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 39 342 - -
Mupr16187g00002 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 361 373 IPR008271 GO:0004672|GO:0006468
Mupr16187g00002 405 Pfam Salt stress response/antifungal 166 259 IPR002902 -
Mupr16187g00002 405 Pfam Salt stress response/antifungal 40 142 IPR002902 -
Mupr16187g00002 405 ProSiteProfiles Gnk2-homologous domain profile. 34 145 IPR002902 -
Mupr16187g00002 405 Gene3D Transferase(Phosphotransferase) domain 1 344 405 - -
Mupr16187g00002 405 Pfam Protein kinase domain 341 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16187g00002 405 ProSiteProfiles Gnk2-homologous domain profile. 151 261 IPR002902 -
Mupr16187g00002 405 ProSiteProfiles Protein kinase domain profile. 232 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16187g00002 405 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Mupr16187g00002 405 FunFam Os07g0541700 protein 329 405 - -
Mupr16187g00002 405 Gene3D - 36 145 IPR038408 -
Mupr16187g00002 405 Gene3D - 155 261 IPR038408 -
Mupr16187g00002 405 SUPERFAMILY Protein kinase-like (PK-like) 274 405 IPR011009 -
Mupr16187g00002 405 Gene3D Phosphorylase Kinase; domain 1 273 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16187g00002 Mupr-Chr16187 15726 17658 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16187g00002 33 405 Receptor kinase-like Gene Family AT4G38830 29.719 2.21e-56 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr16187g00002 Stress-antifung 1.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16187g00002 - - vun:114191742 349.747