Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16157g00004 ATGGCCACTACAATATCTTGTGATTTCTCTTCGTTGGAATCTATTCAACACTATCTTCTTGAGCTTGAACACGATTCCAACACTCTCATGAACGTTTCCAACAACGAAATCTGCTATTCAGAGGTTGTTGGTGACGCCAATGATTTGTTGGCGTGCAAAAGGGAACACCCTATGGTGGCGCATGACGTTCACGCGCCTCCGGTATGGAAGCACTACCGGGGCGTGAGGCGTAGGCCGTGGGGTAAGTTTGCGGCGGAGATAAGGGATCCAAAGAAAAATGGTACTAGGATTTGGCTTGGAACCTATGAGAACGAAAAAGAAGCAGCTTTAGCTTACGATAAAGCTGCTTTCAAGATTCGTGGTAGCAAAGCTAAGTTGAACTTTCCTCATCTTATTGACTCCCATGTGCCTCTGAAACCAGTAAAAATAACAAAGGCTTCAAAGAAAAACTTGTTGGAGCCTTATTTATCGTTCTTACCAGCTTCAGAGACTCAAGGGTCAAAGAAGACGAAGAAATTGGCTCATCTTTTGAACAAGTTGGCCAAGAATCGAAGCCAAGTGCAGATGCTTAAAATGAGAGGCAAACATTAG 591 0.4399 MATTISCDFSSLESIQHYLLELEHDSNTLMNVSNNEICYSEVVGDANDLLACKREHPMVAHDVHAPPVWKHYRGVRRRPWGKFAAEIRDPKKNGTRIWLGTYENEKEAALAYDKAAFKIRGSKAKLNFPHLIDSHVPLKPVKITKASKKNLLEPYLSFLPASETQGSKKTKKLAHLLNKLAKNRSQVQMLKMRGKH 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16157g00004 196 SUPERFAMILY DNA-binding domain 71 130 IPR016177 GO:0003677
Mupr16157g00004 196 FunFam Ethylene-responsive transcription factor 2 70 130 - -
Mupr16157g00004 196 Gene3D AP2/ERF domain 70 130 IPR036955 GO:0003700|GO:0006355
Mupr16157g00004 196 PANTHER DNA-BINDING DOMAIN 64 168 IPR044808 GO:0003700|GO:0009873
Mupr16157g00004 196 PRINTS Ethylene responsive element binding protein signature 72 83 IPR001471 GO:0003700|GO:0006355
Mupr16157g00004 196 PRINTS Ethylene responsive element binding protein signature 111 131 IPR001471 GO:0003700|GO:0006355
Mupr16157g00004 196 ProSiteProfiles AP2/ERF domain profile. 71 129 IPR001471 GO:0003700|GO:0006355
Mupr16157g00004 196 SMART rav1_2 71 135 IPR001471 GO:0003700|GO:0006355
Mupr16157g00004 196 Pfam AP2 domain 71 121 IPR001471 GO:0003700|GO:0006355
Mupr16157g00004 196 CDD AP2 70 131 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16157g00004 Mupr-Chr16157 13302 14369 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16157g00004 71 143 AP2-EREBP Transcription Factor Family AT2G44840 75.342 9.45e-36 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr16157g00004 AP2 3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16157g00004 K09286 - gmx:100527194 278.1