Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16157g00001 ATGGTATCATGGAAGCCATTACAGCACGTGATGGAAACCTTGTGTTCATTTAATAATGCCCCAAAACCAATTTCAGCACCTGCTTCAAAATCCGAGGATGCTTCAACGAAATGGCACAAGAACCAACCACTTTCCAACAGCACTACATTCCAAAACGACATGAATCTCAACACCACTCTCGAATCCGATTTCGCTCTTCTAGATTCCATTCAACGCTACCTCCTCGACGATAACGACGACTTCAATGCTCTAGCCTCGGTTCTCGCCACACCTAACGGCTTTGGTAATGAATCCGTTAACTCTTCGTCGGAGCAAGCAACAACGGCTGCCACCGAGGCGCGTGGGGCATCGTCTTCGGCGGCGCGTGAACCCCACGCTCCATATCAGAGTTACAAGGGAGTGAGGCGTAGGCCTTGGGGAAAGTTTGCGGCTGAGATAAGGGACCCAAATAGGAACGGCGCGAGGGTGTGGCTTGGGACTTATGAGTCGGCTGAAGATGCGGCTTTGGCTTATGATCGAGCCGCTTTTCAAATGCGTGGCTCCAAAGCCAAGCTGAATTTTCCGCACTTAATTGGTTGA 579 0.5043 MVSWKPLQHVMETLCSFNNAPKPISAPASKSEDASTKWHKNQPLSNSTTFQNDMNLNTTLESDFALLDSIQRYLLDDNDDFNALASVLATPNGFGNESVNSSSEQATTAATEARGASSSAAREPHAPYQSYKGVRRRPWGKFAAEIRDPNRNGARVWLGTYESAEDAALAYDRAAFQMRGSKAKLNFPHLIG 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16157g00001 192 Gene3D AP2/ERF domain 130 189 IPR036955 GO:0003700|GO:0006355
Mupr16157g00001 192 MobiDBLite consensus disorder prediction 25 51 - -
Mupr16157g00001 192 PANTHER DNA-BINDING DOMAIN 74 188 IPR044808 GO:0003700|GO:0009873
Mupr16157g00001 192 ProSiteProfiles AP2/ERF domain profile. 130 188 IPR001471 GO:0003700|GO:0006355
Mupr16157g00001 192 MobiDBLite consensus disorder prediction 95 115 - -
Mupr16157g00001 192 SMART rav1_2 130 190 IPR001471 GO:0003700|GO:0006355
Mupr16157g00001 192 PRINTS Ethylene responsive element binding protein signature 170 190 IPR001471 GO:0003700|GO:0006355
Mupr16157g00001 192 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
Mupr16157g00001 192 FunFam Ethylene-responsive transcription factor 2 129 189 - -
Mupr16157g00001 192 CDD AP2 131 190 IPR001471 GO:0003700|GO:0006355
Mupr16157g00001 192 MobiDBLite consensus disorder prediction 95 128 - -
Mupr16157g00001 192 Pfam AP2 domain 131 180 IPR001471 GO:0003700|GO:0006355
Mupr16157g00001 192 SUPERFAMILY DNA-binding domain 130 189 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16157g00001 Mupr-Chr16157 5485 6136 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16157g00001 75 192 AP2-EREBP Transcription Factor Family AT2G44840 57.258 5.18e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr16157g00001 AP2 2.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16157g00001 K09286 - gmx:100806359 184.496