Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16156g00001 ATGGTTTTTCCCGAGAGGGTTTTCCACGTGAAAAATTCTGGTGTCATCTTCCCTCTACTTTTTCAGTTATTTTTTACGCTTCTGCATAGTGCCCATTTTGCATTCACAGAGGAAGGAATAGGTATTGCTGTTTCCCAACAGAAACAAAAGCACTTTGAGCAAGACAAACGGGAGCTACTTGGTGATGATCAGGATGGAGAAACTAATGTGGACATGGTTAATAATTCATCTTCTACCATAAATGCTTTGGACAAGCAAAATAGTGTCCAAGTCATGGAACATGAAGGTGGATTATGTGATGGGGAAGAAGTTGACCAGTTTCATCAACTCTCTGGTGGTAATAAGGTTGCCATTACTAATGAGGATGGTCTTTCATGCGGATCAGAGCTCAAAGAGGTTGACAAAGTAAAATTAAAACAAGAAAGTGATTTGTTGTTTGCGGGGGATGCTTTGGAAGGTGCTCTATGGGATATTTTTCGGAGGCAGGATGTACCTAAATTGCAGGAATATCTGAAGAAGCATTTCAGAGAGTTCAGGCATGTCCATTGCTGTCCTTTAAAGCAGGTTATTCATCCCATCCATGACCAGACCTTCTATCTAACCATGGAAAATAAGAGGAAGCTTAATGAGGAGTATGGAATTGAGCCCTGGACTTTTATTCAGAAGGTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTTCTTACCAAGTCAGAAATCTGAAGTCATGCCTTAAGGTTGCATTGGATTTTGTCTCTCATGAAAATGTTGAGGAAGGCTTCCGTTTGACAGAGGAATTTCGCACGCTTCCAGTAAGTCATGGGTCTACCGAGGACAAATTAGAG 843 0.4128 MVFPERVFHVKNSGVIFPLLFQLFFTLLHSAHFAFTEEGIGIAVSQQKQKHFEQDKRELLGDDQDGETNVDMVNNSSSTINALDKQNSVQVMEHEGGLCDGEEVDQFHQLSGGNKVAITNEDGLSCGSELKEVDKVKLKQESDLLFAGDALEGALWDIFRRQDVPKLQEYLKKHFREFRHVHCCPLKQVIHPIHDQTFYLTMENKRKLNEEYGIEPWTFIQKVGDAVFIPAGCSYQVRNLKSCLKVALDFVSHENVEEGFRLTEEFRTLPVSHGSTEDKLE 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16156g00001 281 Gene3D Cupin 42 275 - -
Mupr16156g00001 281 ProSiteProfiles JmjC domain profile. 25 267 IPR003347 -
Mupr16156g00001 281 SUPERFAMILY Clavaminate synthase-like 153 278 - -
Mupr16156g00001 281 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 27 281 IPR045109 GO:0032454|GO:0033169
Mupr16156g00001 281 SMART cupin_9 72 267 IPR003347 -
Mupr16156g00001 281 Pfam JmjC domain, hydroxylase 154 250 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16156g00001 Mupr-Chr16156 4943 6775 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mupr16156g00001 JmjC 3.6e-13 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16156g00001 K15601 - gmx:100805723 419.853