Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16152g00001 ATGGAAAGTACAGTGACATATGAGAGTGATCTGAATCTCAAGGCAACAGAGCTTAGATTGGGGTTGCCAGGGACGGAGGAGAAAACCGTGCCTGGTGTTAGAAACAACAAAAGGCAAGTTCGTGAAACTTCTCAAGAGTCTGTTTCCATTTCCAAGCCCTCACATGACCAACATGTTCAGAGTGATGCACCTCCTCCTGCCAAGGCAAAGATAGTGGGGTGGCCACCAATCAGATCCTACAGGAAAAACAGCCTGCAGGAGGGTGAGGGAGATGGGATCTATGTGAAAGTGAGCATGGATGGAGCCCCTTACCTCAGAAAGATTGACTTGAAAGTCTATAGGGGCTATGTAGAACTACTCAAAGCTTTAGAGACCATGTTCAAGTTGACCATAGGTGAGTACTCTGAAAGAGAGGGTTACAAGGGATCTGAATATGCACCTACATATGAAGACAAGGATGGTGACTGGATGCTAGTTGGAGATGTTCCATGGGACATGTTTATGACTTCTTGCAAAAGGCTAAGAATCATGAAAGGCTCAGAAGCTAGAGGGCTGGGTTGTGGTGTATGA 570 0.4614 MESTVTYESDLNLKATELRLGLPGTEEKTVPGVRNNKRQVRETSQESVSISKPSHDQHVQSDAPPPAKAKIVGWPPIRSYRKNSLQEGEGDGIYVKVSMDGAPYLRKIDLKVYRGYVELLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFMTSCKRLRIMKGSEARGLGCGV 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16152g00001 189 Pfam AUX/IAA family 36 186 IPR033389 -
Mupr16152g00001 189 Gene3D - 87 189 - -
Mupr16152g00001 189 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 183 IPR003311 GO:0005634|GO:0006355
Mupr16152g00001 189 FunFam Auxin-responsive protein 87 189 - -
Mupr16152g00001 189 ProSiteProfiles PB1 domain profile. 92 179 IPR000270 GO:0005515
Mupr16152g00001 189 MobiDBLite consensus disorder prediction 16 68 - -
Mupr16152g00001 189 MobiDBLite consensus disorder prediction 42 58 - -
Mupr16152g00001 189 SUPERFAMILY CAD & PB1 domains 82 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16152g00001 Mupr-Chr16152 3108 4385 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16152g00001 95 185 B3 DNA Binding Superfamily AT2G46530 38.462 1.72e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr16152g00001 AUX_IAA 3.6e-52 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16152g00001 K14484 - gmx:100800212 339.732