Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mupr16145g00003 | ATGTCGCCGCCGCGTGTGAAGAACATGTTGGCAGGGTTGTGTTTCTGCCACGATGACGACGACAAATACAGAAATCACATGGAGTTTGAACAAGCGTCCATGGATGACGGCAGCCAATACAGCCTCAACGGCATTCCACTTCCTTCTCTTGGTGCCACTGCCGCCACCACCAGCCGGAGACCCAAGCTCCGAGGCTGCATCGTCTCACCATACAACCCTCGTTATAGACTGTGGGAGACATTTCTGGTGTTCTTAGTTTTCTACACTGCATGGGTTTGCCCATTTGAGTTTGGATTCATGAATGAACCCGATGATCCCCTTTCTATTACTGACAATGTGGTCAACGCATGTTTTGCCATTGACGTTATTCTTACCTTCTTTGTTGCGTACCTGGACAAGGCTTCATATCTGCTGGTGGACCAACCAAAGCTCATTGCCAAGAGATATGCCAGAACATGGCTCGCCTTTGATGTCATTTCCACCATCCCTTCTGAATTTGCCCGCAGAGTGTTGCCCCCTCCTCTTAAGACATATGGCTACTTCAATATGCTACGGCTTTGGCGTCTCCGTAGAGTTAGTGCCATGTTTGCAAGATTAGAAAAGGACAGAAATTATAACTACTTCTGGATACGCTGTTCGAAGCTTATATGTGTTACTCTATTTTCAGTGCATTTTGCTGCCTGCTTTTACTATTTTCTTGCTGCAAATCGTGAACAAAAATCAACATGGCTTAGCCTGGTTTCTGATGACACTAAAAACAGTGTTTGGAAACGCTATATAACATCGATGTACTGGTCCATAGTGACTCTTACAACAGTCGGTTATGGTGACCTGCATCCTGTAAATACCCAGGAGATGGTGTTTGACATATTTTTTATGCTCTTTAACCTGGGACTAACGTCATATCTCATCGGAAACATGACAAACTTGGTTGTTCACGGGACAAGCAGAACTAGGAAATATAGAGACACCGTGCAAGCTGCCACAGGTTTTGCCCATAGGAATCAGTTACCTATCCGCTTGCAAGAACAGATGCTTGCTCATTTGTTTATGAAGTACAGAACTGATTTAGAAGGATTGCAGCAACAAGAAATTATTGAATCCCTTCCAAAAGCTATTCGATCTAGCATCTCACACTACCTATTCTATTCACTTGTCGACAAAGTGTACTTATTTCATGGAGTGTCAAGTGACCTACTCTTTCAACTGGTCACAGAGATGAAGGCTGAGTATTTTCCTCCAAAGGAAGATGTGATTTTGCAGAATGAAGCGCCAACAGATTTTTATATCTTCGTCACCGGTGCTGCAGTCGTTGGTGAGGCTGCGTCAGGAGATATAGTTGGAGAAATAGGAGTTCTATGTTACAGGCCACAGATGTTTACAGTTCGAACCAAACGATTGAGCCAAATTCTGCGCTTGAACCGTACTACATTTATAAGTCTTGTTCATTCAAATATTGGGGATGGGACAATAGTCATGAACAATTTTCTCCAGCATTTGCAACAATCAAGGTATCCAGGGATGGATATTATTTTGGCAGAAACGGAGGCCATGCTTGCTCGGGGTAGAATGGATATGCCCATTACCACATGCTTTGCAGCAAGCAGAAATGATGATCTATTGTTACACCGTATGCTTAAGAAGGGTTTAGATCCAAATGAATTGGATAAGAATGGAAAGACCGCACTGCATATTGCAGCTTTCAATGGCAACATGCATTGTGTAACTTTGCTTCTAGAGTATGGTGCTGATCCTAATAGCAAAGATCTAGACGGAAGTGTCCCACTATTTGAAGCAATGAAGGGTAGGCATGAATCTGTCATGAAACTTCTCATGGACAATGGTGCAGACATATCTTTTGCAGATGCAGGCCATCTAGCATGCACTGCTGTTGAGCAAAATGACATGGAATTGCTCAAGAAATTAATTCAATGTGGTGTGGATGTAACACAACCCAAAAAGAATGGAACCACCGCTCTGCATGCTGCAATATGTGAAGGAAAAGCTGAGCTGATTAGGTTCCTTGTAGACCAAGGAGCAGACATTGATAAGCCAGATGGTAGTGGGTGGACTCCCAGGAATTTGGCAGAACAGGAAGAGGATGAAGAAATTAGAAATGTATTCCACAATATTAAAGAGAGCAGAAAACCACCTCTTATTCCAATATCAAAGAATGACAGAAGTGGGAGGTTTCAAGGGGATTCCAGCATGTCTGACATTTCCCAAGAAAGCATTCCAAAGCCACCTACTCAAGAGTTGACTTGGCTAGATAATCAAGGAAGGATGTCTTCCAGCTCTTTTCATAATTCCATTTTTGGAATGATCTCAACTGCCAATCGTGATAGAAGAGATATTCGGGCATCTGAGAGCATTAACAGTGATAGATCGAATGCGAATGGATCAATGAGAGTGACACTTAGTTGTCCTGAAAAAGGTAATCATGCTGGAAAGCTTGTTTTGCTGCCCAAGACCCTAGAAGAGCTGCTAGATATTGGTGCCAAAAAGTTCGGTGTATCTCCCACCAAAATTTTGACTTCAGATGGAGCTGAAGTTGACGATATAAATCTTATTAGAGATGATGATCATCTTATTATTGCACGGGACTGA | 2607 | 0.4285 | MSPPRVKNMLAGLCFCHDDDDKYRNHMEFEQASMDDGSQYSLNGIPLPSLGATAATTSRRPKLRGCIVSPYNPRYRLWETFLVFLVFYTAWVCPFEFGFMNEPDDPLSITDNVVNACFAIDVILTFFVAYLDKASYLLVDQPKLIAKRYARTWLAFDVISTIPSEFARRVLPPPLKTYGYFNMLRLWRLRRVSAMFARLEKDRNYNYFWIRCSKLICVTLFSVHFAACFYYFLAANREQKSTWLSLVSDDTKNSVWKRYITSMYWSIVTLTTVGYGDLHPVNTQEMVFDIFFMLFNLGLTSYLIGNMTNLVVHGTSRTRKYRDTVQAATGFAHRNQLPIRLQEQMLAHLFMKYRTDLEGLQQQEIIESLPKAIRSSISHYLFYSLVDKVYLFHGVSSDLLFQLVTEMKAEYFPPKEDVILQNEAPTDFYIFVTGAAVVGEAASGDIVGEIGVLCYRPQMFTVRTKRLSQILRLNRTTFISLVHSNIGDGTIVMNNFLQHLQQSRYPGMDIILAETEAMLARGRMDMPITTCFAASRNDDLLLHRMLKKGLDPNELDKNGKTALHIAAFNGNMHCVTLLLEYGADPNSKDLDGSVPLFEAMKGRHESVMKLLMDNGADISFADAGHLACTAVEQNDMELLKKLIQCGVDVTQPKKNGTTALHAAICEGKAELIRFLVDQGADIDKPDGSGWTPRNLAEQEEDEEIRNVFHNIKESRKPPLIPISKNDRSGRFQGDSSMSDISQESIPKPPTQELTWLDNQGRMSSSSFHNSIFGMISTANRDRRDIRASESINSDRSNANGSMRVTLSCPEKGNHAGKLVLLPKTLEELLDIGAKKFGVSPTKILTSDGAEVDDINLIRDDDHLIIARD | 868 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mupr16145g00003 | 868 | FunFam | Potassium channel KAT3 | 77 | 313 | - | - | |
| Mupr16145g00003 | 868 | ProSiteProfiles | Ankyrin repeat region circular profile. | 655 | 686 | - | - | |
| Mupr16145g00003 | 868 | ProSiteProfiles | Ankyrin repeat profile. | 591 | 623 | IPR002110 | GO:0005515 | |
| Mupr16145g00003 | 868 | Pfam | Ankyrin repeats (3 copies) | 532 | 619 | IPR002110 | GO:0005515 | |
| Mupr16145g00003 | 868 | Pfam | Ankyrin repeats (3 copies) | 630 | 704 | IPR002110 | GO:0005515 | |
| Mupr16145g00003 | 868 | Pfam | KHA, dimerisation domain of potassium ion channel | 803 | 865 | IPR021789 | - | |
| Mupr16145g00003 | 868 | CDD | CAP_ED | 391 | 485 | IPR000595 | - | |
| Mupr16145g00003 | 868 | SUPERFAMILY | Ankyrin repeat | 531 | 710 | IPR036770 | - | |
| Mupr16145g00003 | 868 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 391 | 499 | IPR000595 | - | |
| Mupr16145g00003 | 868 | FunFam | Potassium channel KAT2 | 379 | 504 | - | - | |
| Mupr16145g00003 | 868 | SUPERFAMILY | Voltage-gated potassium channels | 70 | 312 | - | - | |
| Mupr16145g00003 | 868 | SUPERFAMILY | cAMP-binding domain-like | 316 | 501 | IPR018490 | - | |
| Mupr16145g00003 | 868 | MobiDBLite | consensus disorder prediction | 717 | 749 | - | - | |
| Mupr16145g00003 | 868 | Gene3D | Jelly Rolls | 357 | 507 | IPR014710 | - | |
| Mupr16145g00003 | 868 | ProSiteProfiles | Ankyrin repeat profile. | 655 | 687 | IPR002110 | GO:0005515 | |
| Mupr16145g00003 | 868 | SMART | cnmp_10 | 391 | 497 | IPR000595 | - | |
| Mupr16145g00003 | 868 | MobiDBLite | consensus disorder prediction | 728 | 749 | - | - | |
| Mupr16145g00003 | 868 | Pfam | Ion transport protein | 76 | 318 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
| Mupr16145g00003 | 868 | PRINTS | Ankyrin repeat signature | 559 | 574 | IPR002110 | GO:0005515 | |
| Mupr16145g00003 | 868 | PRINTS | Ankyrin repeat signature | 607 | 621 | IPR002110 | GO:0005515 | |
| Mupr16145g00003 | 868 | PANTHER | POTASSIUM CHANNEL AKT1 | 38 | 865 | IPR045319 | GO:0005249|GO:0006813 | |
| Mupr16145g00003 | 868 | SMART | ANK_2a | 558 | 587 | IPR002110 | GO:0005515 | |
| Mupr16145g00003 | 868 | SMART | ANK_2a | 655 | 684 | IPR002110 | GO:0005515 | |
| Mupr16145g00003 | 868 | SMART | ANK_2a | 591 | 620 | IPR002110 | GO:0005515 | |
| Mupr16145g00003 | 868 | SMART | ANK_2a | 622 | 651 | IPR002110 | GO:0005515 | |
| Mupr16145g00003 | 868 | PRINTS | EAG/ELK/ERG potassium channel family signature | 303 | 312 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
| Mupr16145g00003 | 868 | PRINTS | EAG/ELK/ERG potassium channel family signature | 285 | 296 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
| Mupr16145g00003 | 868 | PRINTS | EAG/ELK/ERG potassium channel family signature | 122 | 131 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
| Mupr16145g00003 | 868 | PRINTS | EAG/ELK/ERG potassium channel family signature | 88 | 95 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
| Mupr16145g00003 | 868 | PRINTS | EAG/ELK/ERG potassium channel family signature | 111 | 121 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
| Mupr16145g00003 | 868 | PRINTS | EAG/ELK/ERG potassium channel family signature | 259 | 276 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
| Mupr16145g00003 | 868 | ProSiteProfiles | Ankyrin repeat profile. | 558 | 590 | IPR002110 | GO:0005515 | |
| Mupr16145g00003 | 868 | ProSiteProfiles | Ankyrin repeat region circular profile. | 558 | 589 | - | - | |
| Mupr16145g00003 | 868 | ProSiteProfiles | Ankyrin repeat region circular profile. | 591 | 622 | - | - | |
| Mupr16145g00003 | 868 | Gene3D | - | 527 | 710 | IPR036770 | - | |
| Mupr16145g00003 | 868 | ProSiteProfiles | KHA domain profile. | 803 | 868 | IPR021789 | - | |
| Mupr16145g00003 | 868 | Gene3D | - | 76 | 312 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mupr16145g00003 | Mupr-Chr16145 | 21224 | 26743 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mupr16145g00003 | 18 | 868 | Ion Channels | AT2G25600 | 57.192 | 0.0 | 989 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mupr16145g00003 | K21867 | - | gmx:100802964 | 1397.1 |