Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16136g00002 ATGGAAGAAAAAGCTGCGTTAAAAAAATTGCTCGAAGATGAGGAAAGGCCATATGATAATAGTACAAACGCACGGAACGGGACCGATGAACCATCCTTTCGTAATACTATGGGATCTACTCTTCTGAGCTTGAGCCTGAATAACTCAGGACAGCCCCTTACCCAAATAGGTATGCTGCGAATCAAGCTTGAGGAAGCGAAGAAAGAGAATGAGATTTTAAAGGCTATGCTATGTCAGGTCAATGAACACTTCACTACTCTTCAGAATCGCATACTTTTTGAGATGCAGCAGCATCAACTATCTTCATCATCTTGCAAAAATAATAATGACTCGCAGGGCAATAGAAAAGATGCGGAGAAACCAATGCTACACACACGTCAGTTTTTGAATATTGGTGAGTCTTCACTTTTAGACGGCAACACCGAAGGATGTGCCTCAGCAGAGAACATTGAAAAGAAAATATTAGGCAGAAACCATGCATGTGATAAGTACAATGTTGAAGGTGAAATCAACAGCCAAATAACATCGCATGAAGCAAAACGCACCAAGGATCAAGCATTTGAGGTTACTTGCCGGAGAGCTAAAGTGTCCATAAGAGCACGATCAGATTTTTCTTTGATTGGTGATGGTTGTCAATGGAGAAAATATGGACAAAAGACAGCGAAAGGCAACCCTTGTCCCCGGGCCTACTACCGTTGCAGCATGGGAACTGCATGTCCAGTTCGTAAGCAGGTGCAAAGGTGTTTTAAGGATGAAACTGTTCTCATCACAAGCTATGAAGGGAACCATAATCATCCACTCCCACCAGCAGCCAGACCTATGGCAAGCTCAACATCAGCAGCATTGAACATGTTCCTTTCAGGCTCAATCACAAGCTCACATGGTAGCACCACTCTATCAAACCCACACCTCTTCTCTTCATCACTATCTAGTATTTCCCCAACTGCTATAGCTACTTTCTCCCAATCTTCAACATGTCCCACAGTAACACTGGACTTAACCCAGACCAGTAACAACTATCTGCAGTTCCAAAGGGCCACTACTTCACAAAACAACAGTCAACCATTTTTCCCTCTTCCACTGCATGGCCACCCTCAAAGTTCTAACAACCTTCCAACCATGTTAACCCCAGAGAAAAACCTTGCCTTGGTGGATGTTGTCAGTGAAGCTATAGCCAAAGATCCTTCTCTCAAGGCAGCATTGTTTTCAGCCATTTCCTCACTCACTGGAGATCCTCAGAAGAACATCAATAATCACAGCCAACATAGTAAGAGTAGTGCTTGTTCTAAGATGCAGGCAATACCACCTCATCAGCCTTACACTACTCAGTTGATTTAG 1338 0.4335 MEEKAALKKLLEDEERPYDNSTNARNGTDEPSFRNTMGSTLLSLSLNNSGQPLTQIGMLRIKLEEAKKENEILKAMLCQVNEHFTTLQNRILFEMQQHQLSSSSCKNNNDSQGNRKDAEKPMLHTRQFLNIGESSLLDGNTEGCASAENIEKKILGRNHACDKYNVEGEINSQITSHEAKRTKDQAFEVTCRRAKVSIRARSDFSLIGDGCQWRKYGQKTAKGNPCPRAYYRCSMGTACPVRKQVQRCFKDETVLITSYEGNHNHPLPPAARPMASSTSAALNMFLSGSITSSHGSTTLSNPHLFSSSLSSISPTAIATFSQSSTCPTVTLDLTQTSNNYLQFQRATTSQNNSQPFFPLPLHGHPQSSNNLPTMLTPEKNLALVDVVSEAIAKDPSLKAALFSAISSLTGDPQKNINNHSQHSKSSACSKMQAIPPHQPYTTQLI 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16136g00002 445 Gene3D WRKY domain 191 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr16136g00002 445 ProSiteProfiles WRKY domain profile. 202 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr16136g00002 445 MobiDBLite consensus disorder prediction 21 36 - -
Mupr16136g00002 445 MobiDBLite consensus disorder prediction 1 20 - -
Mupr16136g00002 445 MobiDBLite consensus disorder prediction 1 36 - -
Mupr16136g00002 445 SMART WRKY_cls 207 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr16136g00002 445 Pfam WRKY DNA -binding domain 209 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr16136g00002 445 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 55 422 IPR044810 GO:0003700
Mupr16136g00002 445 MobiDBLite consensus disorder prediction 411 445 - -
Mupr16136g00002 445 Coils Coil 56 76 - -
Mupr16136g00002 445 SUPERFAMILY WRKY DNA-binding domain 201 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16136g00002 Mupr-Chr16136 13007 18345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16136g00002 59 336 WRKY Transcription Factor Family AT4G04450 41.667 1.05e-66 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr16136g00002 WRKY 4.5e-22 CL0274