Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1612g00005 ATGTCCAATTTCCTTAAATCCTTGACGCGAGCGCCATCCGGGTGGTCTTCGTCGAAGCCGTTCTGCCAATGGAGCGGTGTCCAATGCGATTCGTCGAACCGCGTGACCAGCATAAGCCTCGCTTCAATGTCCCTCACCGGAACGCTCCCCTCGGATCTCAATTCCCTCTCTCAACTCCGCCAGCTCTCACTCCAAGACAACGCCCTTTCCGGCCCCCTTCCCTCTCTTGCCGAACTCTCCTTCCTCCAAACTGCCTACCTCAACCACAACAATTTCACCTCCGTCCCCCCCGCCGCCTTCGCCGCCCTCACCTCGCTCCAAATCCTCAGCCTCGGTTCCAACCCTAGCCTCGCCCCCTGGCCCTTCCCCACCGACCTCGCCTCCTCCACAAGCCTCAACGACCTCGACCTCGGCACCGCCAGCCTCACCGGTCCCTTGCCGGACATCTTCGACAAACTCATCTCTCTCCAGAACCTTCGCCTCTCCTACAACAACCTCACCGGCAATTTACCTAACTCCCTCGCCGCCTCCTCAATCACCAAGCTCTGGATCAACAACCAGGCCACCGGCTTCTCCGGTACCATTGACGTTCTGTCCAACATGACCGAGCTCTATCAGGCGTGGCTCCACAAGAACCAGTTCACCGGTTCCATTCCCGATTTGTCGCAATGCAAGAGCTTGTTTGATTTGCAGCTCAGGGACAACCAGTTAACCGGTGTGGTGCCGAGTTCCTTGATGGGGATTTCGGCTTTGAAGAATGTTTCGCTGGACAACAACGAGCTTCAGGGCCCTGTGCCGGTGTTTGGGAAAGACGTGAAGGTTACTCTCGATGGGATCAATAGCTTTTGTCTCGACACTCCCGGAGATTGCAATCCCAGGGTGATGGTTTTGCTTCAGATTGCTGAGGCTTTCGGCTACCCCATTCGGTTGGCAAATTCGTGGAAGGGGAATGACCCTTGTAATGGTTGGAGCTTTGTTGTGTGTGCTGAAGGGAAGATTATCACCGTCAATTTCGCGAAGCAGGGTTTGCAGGGTTCCATCTCGCCTGCATTTGCCAATTTGACTGATTTGAGGAACTTGTTTCTCAATGGGAATAATTTGACCGGTTCTATTCCTGAGAGTTTGACCACATTGTCTCAGCTTGCGACTCTTGATGTTTCTGATAACAACCTCTCTGGAGAGATTCCCAAGTTCCTACCCAAGGTTAAGTTAGTGATTGCACCGGGTAATGCTTTGCTTGGGAAAGCTTCTAGTCCTGGAGGTGGAGGAGCTAGTGGAACTACTCCTTCTTCAGGGTCTGCATCTGGTGGAAGTGGTGGGGAATCTGCAAATGGCACTTCTTCATTGTCACCGGGTTGGATTGCTGGTATAGTTGTTATTGTTATCTTTTTTATTGCAGTGGTGTTGTTTGTGTCTTGGAAGTGTTATGCCAAAAAGCAGCAGCGGAAGTTCAGGAGGGTTAATGGTCGTGAAAATGGAAAAGAAAGCTTTAAGCTTGATGTTGCTAGTGTTTCTAATGGATATGGTGGTGTTCACAGTGAGTTGCAAAGCCAGAGCAGTGGTGATCACAGTGACTTTCTTCATACTTTTGAAGGTGGGAATGCGACAATTTCGATCCAAGTTCTTCGACAAGTGACGAATAATTTCAGTGAGGAGAACATTTTAGGCAGGGGAGGGTTTGGAGTAGTTTATAAGGGGGAGTTGCATGATGGAACAAAAATTGCTGTCAAGAGGATGGAATCTGTTGCAATGGGAAACAAAGGATTGAACGAGTTCCAAGCAGAGATTGCAGTTCTTAGTAAAGTTAGGCATAGACATTTGGTTGCACTTCTAGGGTATTGCATCAATGGTAATGAAAGGCTTTTGGTGTATGAGTATATGCCTCAGGGTACATTAACACAGCACCTGTTTGAATGGGGTGAACTTGGGTATGCTCCTTTGACTTGGAAACAAAGGGTAGCAATAGCTTTGGATGTAGCTCGGGGGGTGGAATACTTGCACAGCTTAGCTCAGCAAAGCTTCATTCATAGAGACTTAAAACCCTCAAACATATTACTAGGTGATGATATGAGAGCAAAGGTTGCAGATTTTGGGTTGGTTAAAAATGCACCAGATGGGAAGTATTCTGTTGAGACACGGTTGGCTGGAACATTTGGATATCTTGCACCTGAATATGCTGCTACTGGAAGAGTGACAACCAAAGTGGATGTTTATGCATTTGGAGTAGTTTTGATGGAACTTATCACCGGTAGAAAGGCATTGGATGATAGTGTGCCAGATGAAAGGTCTCACTTGGTTACATGGTTCCGTCGGGTACTAATTAACAAGGAAAACATTCCAAAGGCAATTGATCAAATTCTGAATCCCGATGAGGAAACCATGGAGAGCATATATAAAGTGGCTGAGCTGGCAGGCCATTGCACTGCTCGTGAACCATACCAAAGGCCAGATATGGGTCATGCAGTGAATGTGTTGGTTCCTCTTGTGGAGCAATGGAAACCTACTAGCCACGAAGAAGAGGACAGCTCTGGTGTTGAGTTGAGCCTTCCTCAAGCTCTACGAAGGTGGCAAGCCAATGAAGGCACTTCCTCAACAATATTTAACGATATGTCCTTCTCACAAACCCAATCAAGCATCCCCTCTAAACCTGCAGGATTTGCAGACTCCTTTGATTCATTGGATTGCCGGTAA 2691 0.4842 MSNFLKSLTRAPSGWSSSKPFCQWSGVQCDSSNRVTSISLASMSLTGTLPSDLNSLSQLRQLSLQDNALSGPLPSLAELSFLQTAYLNHNNFTSVPPAAFAALTSLQILSLGSNPSLAPWPFPTDLASSTSLNDLDLGTASLTGPLPDIFDKLISLQNLRLSYNNLTGNLPNSLAASSITKLWINNQATGFSGTIDVLSNMTELYQAWLHKNQFTGSIPDLSQCKSLFDLQLRDNQLTGVVPSSLMGISALKNVSLDNNELQGPVPVFGKDVKVTLDGINSFCLDTPGDCNPRVMVLLQIAEAFGYPIRLANSWKGNDPCNGWSFVVCAEGKIITVNFAKQGLQGSISPAFANLTDLRNLFLNGNNLTGSIPESLTTLSQLATLDVSDNNLSGEIPKFLPKVKLVIAPGNALLGKASSPGGGGASGTTPSSGSASGGSGGESANGTSSLSPGWIAGIVVIVIFFIAVVLFVSWKCYAKKQQRKFRRVNGRENGKESFKLDVASVSNGYGGVHSELQSQSSGDHSDFLHTFEGGNATISIQVLRQVTNNFSEENILGRGGFGVVYKGELHDGTKIAVKRMESVAMGNKGLNEFQAEIAVLSKVRHRHLVALLGYCINGNERLLVYEYMPQGTLTQHLFEWGELGYAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRKALDDSVPDERSHLVTWFRRVLINKENIPKAIDQILNPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTSHEEEDSSGVELSLPQALRRWQANEGTSSTIFNDMSFSQTQSSIPSKPAGFADSFDSLDCR 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1612g00005 896 Gene3D Ribonuclease Inhibitor 292 413 IPR032675 -
Mupr1612g00005 896 MobiDBLite consensus disorder prediction 421 445 - -
Mupr1612g00005 896 Pfam Leucine rich repeat N-terminal domain 4 30 IPR013210 -
Mupr1612g00005 896 Pfam Leucine rich repeat N-terminal domain 296 328 IPR013210 -
Mupr1612g00005 896 PANTHER OSJNBA0070M12.3 PROTEIN 1 896 - -
Mupr1612g00005 896 Pfam Protein tyrosine and serine/threonine kinase 552 822 IPR001245 GO:0004672|GO:0006468
Mupr1612g00005 896 Gene3D Transferase(Phosphotransferase) domain 1 627 849 - -
Mupr1612g00005 896 Gene3D Phosphorylase Kinase; domain 1 510 626 - -
Mupr1612g00005 896 SUPERFAMILY Protein kinase-like (PK-like) 525 834 IPR011009 -
Mupr1612g00005 896 ProSitePatterns Serine/Threonine protein kinases active-site signature. 674 686 IPR008271 GO:0004672|GO:0006468
Mupr1612g00005 896 FunFam receptor protein kinase TMK1 627 844 - -
Mupr1612g00005 896 SUPERFAMILY L domain-like 15 398 - -
Mupr1612g00005 896 ProSiteProfiles Protein kinase domain profile. 549 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1612g00005 896 CDD STKc_IRAK 555 828 - -
Mupr1612g00005 896 Gene3D Ribonuclease Inhibitor 2 289 IPR032675 -
Mupr1612g00005 896 SMART LRR_typ_2 153 176 IPR003591 -
Mupr1612g00005 896 SMART LRR_typ_2 354 378 IPR003591 -
Mupr1612g00005 896 SMART LRR_typ_2 79 102 IPR003591 -
Mupr1612g00005 896 SMART serkin_6 549 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1612g00005 896 ProSitePatterns Protein kinases ATP-binding region signature. 555 577 IPR017441 GO:0005524
Mupr1612g00005 896 FunFam receptor protein kinase TMK1 510 626 - -
Mupr1612g00005 896 FunFam Leucine-rich repeat receptor-like kinase 292 416 - -
Mupr1612g00005 896 MobiDBLite consensus disorder prediction 417 445 - -
Mupr1612g00005 896 FunFam Receptor-like kinase TMK4 1 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1612g00005 Mupr-Chr1612 23432 26828 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1612g00005 35 825 Receptor kinase-like Gene Family AT5G07280 32.882 1.46e-93 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mupr1612g00005 PK_Tyr_Ser-Thr 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1612g00005 K00924 - gmx:100286794 1432.54