Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1610g00004 ATGAAGCGGGCGAGGAAATCCAACAGGGTTTCGTGGGCTACTGGAGGGAACCTGTGTCAGGTAAAGTTGTTCTTGTCTGAGGATTACCCCTCAAAAGTTGGCCAGAAATCGCAAGATCATCTTCAAGCAAAGACATCATCAATGTTGCATTCTAGTATTAATGAACCTAATGATTTACCCCCTGGGTTTGAAAGCGGTCATTTCCTAAACCAACCAAAGGTTGAATTCTCCTACATTTCTCAGATAAAATGGGAATGCCCTCCGCCGTTTGTTGTCAGTTCTCATTGGCGAGTTGCAGCTGGTGAAGAAAGTAGGGAGAAAGAGGATCAGAAACTGAGAGAAATGAGAGTGCTTGAAGCTGTTTATCCTCGTCCTTCTGCCATTCCTCCTAGCCCTTCTGTCTCTTTGGACGTAGAAGAGGAAGATTATGATGATAACATTACTCCTCCCATCCCTATCATTCCCATTGAAGAGGAAGAATCTATGGATACTTTGCCTGAATTGGCAGTAGCAGTGAACCCTTCCCCCAATGTGAAGTTGCAGAACTCTCAGCAATATATATCTGCAAAAACTTCCGTTAGTTCAGCCTCTAATGCCTCTCATTTGGTTTCCTTGGATCCCTGTGTAAGGCCCTCAGCTGGGGTATCTTCTGGTTTGGAAGCTGATTTAGCAGCAGCCTCTTCTGCTGTAGCAACCATTATGAGGAGTAATGAGCAAGGGCGCCTCATTGATATGGACTTACTGGTTAAAATACTTAATGATCCAAAAATAGTTGAGAAGTTGATTAATGAACATGGAACTGCAGCTACCATTGAAAGAGCTTCCTCAAATACTGTGGACCTACCCACTTCTGGTGTGAAGCCTGCTCTGTTGTCTACATCTTCACCTGATGTGACAGCTTCTGGAACTGCACCCACAAGTGCAGTCAGTTTATTGCCTTCGGGGTTGAAGCCTGCAAATCCATCAGTTTCCTTATTGAATCCTGCACCTGATAAGCCAGCCACTCTGTCAGCGCCTGCAATTCCACCAGTTTCACTATTGTCTTCTATGCATGATAAACCGGTGACTGCATCAGTTCCATTGTCTAGGCCTTTATCTGGTAAGCCAGTAACTCCCTCAGTTTCATTGCTTACACATACACCTGCACCTCATATGCACAGGTCTGTCAGCAAAACTTTTCACCCTGTGTCAAGTGGAATGCCCCCTGCTTTAAATACCCAGTCTCAGCAAGATACAGCTCTGGCATCCGGTGCAAAGCGAGCTGCATCAGTGGCGTCCATATCTTCTAGTGAATTAAGCCCTGTGCCATTGCCATCTGCTACTGGTAACTTGCATGCAGTTGTGAATCAGGCACAGCCCACTGCCAGAGCAATGCCTTATAAACTAAGCACAGGTTCAGCATTTGCTGTAAAGGATGCCAACTACTATAAAAACCTCATCAGGCAACATGGTGCAGATAAGCAAGATATGCAGGACTCACATATAGGTATTCGTCATAGTAACTTCCAAGATATGAAACCGGTACATAACATTAAACAAGGAGAAGTGAAACAGAAAATCCAGAAACCATGCATTTACTTTAAAAGCTCAAGGGGGTGCCGAAATGGTTCCAATTGCCCCTATCAGCATGATGTTCCAGTTCAGTTGGGAGCTGGTAACGACCTGGGGGCACAGAGTGCAAAAAGATTGAAATTGGGATCAGAAATTTAG 1710 0.448 MKRARKSNRVSWATGGNLCQVKLFLSEDYPSKVGQKSQDHLQAKTSSMLHSSINEPNDLPPGFESGHFLNQPKVEFSYISQIKWECPPPFVVSSHWRVAAGEESREKEDQKLREMRVLEAVYPRPSAIPPSPSVSLDVEEEDYDDNITPPIPIIPIEEEESMDTLPELAVAVNPSPNVKLQNSQQYISAKTSVSSASNASHLVSLDPCVRPSAGVSSGLEADLAAASSAVATIMRSNEQGRLIDMDLLVKILNDPKIVEKLINEHGTAATIERASSNTVDLPTSGVKPALLSTSSPDVTASGTAPTSAVSLLPSGLKPANPSVSLLNPAPDKPATLSAPAIPPVSLLSSMHDKPVTASVPLSRPLSGKPVTPSVSLLTHTPAPHMHRSVSKTFHPVSSGMPPALNTQSQQDTALASGAKRAASVASISSSELSPVPLPSATGNLHAVVNQAQPTARAMPYKLSTGSAFAVKDANYYKNLIRQHGADKQDMQDSHIGIRHSNFQDMKPVHNIKQGEVKQKIQKPCIYFKSSRGCRNGSNCPYQHDVPVQLGAGNDLGAQSAKRLKLGSEI 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1610g00004 569 MobiDBLite consensus disorder prediction 35 54 - -
Mupr1610g00004 569 ProSiteProfiles Zinc finger C3H1-type profile. 518 546 IPR000571 GO:0046872
Mupr1610g00004 569 MobiDBLite consensus disorder prediction 35 57 - -
Mupr1610g00004 569 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1610g00004 Mupr-Chr1610 49164 57325 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1610g00004 81 171 Homeobox Transcription Factor Family AT4G02560 40.426 2.26e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr1610g00004 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1610g00004 - - gmx:102661587 843.958