Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1610g00001 ATGATGATGGAGCCATGTGTCCCACCGGGGTTTAGATTCCACCCAACAGATGACGAGCTTGTTGGTTATTATCTCAGGAGGAAAGTTGCTTCTCAGAAGATTGATCTTGACGTTATCAAAGAGATCGACCTATATCGTATTGAACCATGGGATCTCCAAGAGAGATGCAGGATTGGGTATGAGGAGAGGAATGAGTGGTATTTCTTTAGCTACAAAGATAAGAAATATCCAACAGGGACAAGAACCAACAGAGCTACCATGGCAGGGTTTTGGAAAGCAACAGGAAGAGACAAATCAGTGTACGAAAGGACCAAACTCATTGGCATGAGAAAGACCCTCGTTTTCTACAAAGGAAGAGCCCCTAATGGACAGAAAACTGATTGGATCATGCACGAGTATAGGCTTGAAACTGTCGAGAATGGACCTCCTCAGGCAAGCATCTCTATACACTTAACATATATATATCTCCATCGTGCATATGCCATATATACCCATTTACGCATTGAAGAAGGATGGGTGGTGTGCAGAGCATTCAGGAAAAGAACTAGCGGCCAAACAAAGACTATTGAAGGATGGGATCGAAGTGGAAGCTACTTATTATACGATGAACAAGCAAGTGGTGTGAGCTCTGTGGTGGACCCCATTGACCATATCTTAAGGCAACCTCAGAGGTTTTCAGCTCAGAATTTCATGTACAAGCAAGAGATCGAAGCAGATAATTTGAGCTTCGTGCATGCAGACCAATTGGTGCAGCTTCCGCAGCTAGAAAGCCCTTCTTTGCCAATGGTAAAGAGGCAAAGCTCAGTGTCCCTTATATCAGACAACAACGAAGAAGATTATCAAAAGGGGTTATCCAACACAAAGAAAGTGATTGATTGGAGGGCTCTTGACAAGTTTGTTGCTTCTCAGTTGAGTCCAGAAATAGAAGGGGTTTCAAGCTTTGCAACACATTCTAGCTCAGACATGGCATTGCTGTTACTTCAGAGTAGTAGGGATAATGAAGGGAACAAGTTCAACCCATTTTTAAATACAAGCTCATCAGACAGTGACATTGGGATATGCATGTTTGAAAAA 1074 0.4283 MMMEPCVPPGFRFHPTDDELVGYYLRRKVASQKIDLDVIKEIDLYRIEPWDLQERCRIGYEERNEWYFFSYKDKKYPTGTRTNRATMAGFWKATGRDKSVYERTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLETVENGPPQASISIHLTYIYLHRAYAIYTHLRIEEGWVVCRAFRKRTSGQTKTIEGWDRSGSYLLYDEQASGVSSVVDPIDHILRQPQRFSAQNFMYKQEIEADNLSFVHADQLVQLPQLESPSLPMVKRQSSVSLISDNNEEDYQKGLSNTKKVIDWRALDKFVASQLSPEIEGVSSFATHSSSDMALLLLQSSRDNEGNKFNPFLNTSSSDSDIGICMFEK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1610g00001 358 Gene3D NAC domain 16 184 IPR036093 GO:0003677|GO:0006355
Mupr1610g00001 358 FunFam Nac domain-containing protein 86 16 160 - -
Mupr1610g00001 358 ProSiteProfiles NAC domain profile. 7 180 IPR003441 GO:0003677|GO:0006355
Mupr1610g00001 358 SUPERFAMILY NAC domain 2 180 IPR036093 GO:0003677|GO:0006355
Mupr1610g00001 358 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Mupr1610g00001 358 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1610g00001 Mupr-Chr1610 12096 15049 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1610g00001 3 357 NAC Transcription Factor Family AT2G18060 56.812 2.81e-144 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr1610g00001 NAM 3.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1610g00001 - - pop:7480169 522.702