Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16102g00001 ATGGCAGCTTTTTCATACCAGTACCACCCTTTTCTTCTTGACCCAGCATTCTTTCCCACTCCTTCTTCTCCTCAGTTTCACCTCCCTCAGGAAACATCTTTTAATGTCACAAACCAGGAGACTAGCTGTGTTGACCAAAGCTCCAAGATCACCATCAGTGACAATGAGCCTTCTGTCACTAAAAACCTTAGTCCTCAGTCCTCCATAGTCGTCGACAAGCTTGAAACTGGTGAACAGGTCACTCAGAAGGTCACTCCTGTGGAGAAGAAGAGAAGAACCAGAAATGGATCTTCCTTGAGTAACCCCCCTTCCAAGGATACTGCAAACAAGAAACAAAGGAAGAGCAATGGTGGGTTGAAAGAAGAGGAAAAGCCAAAAGAAGAGAAGAAGGATCAGAGAAAGTGTCCTGAAGAGCCCCCAACAGGTTATATCCACGTCAGAGCAAGAAGGGGTCAGGCAACGGATAGCCACAGCCTTGCTGAGAGGGTGAGAAGAGAGAAAATAAGCGAAAGGATGAAGGTGTTGCAACGGCTTGTGCCAGGCTGTGATAAGGTAACTGGAAAGGCCCTTATGTTGGACGAAATAATCAATTATGTTCAGTCTTTACAGAATCAAGTTGAGTTCTTGTCAATGAAGCTTGCTTCCGTGAATCCCATGTTTTATGACTTGGCAACAGACCTAGACACCCTCATGGTTAGATCAGAGAAACTAAATAGCATGGCATCACCATCGCCCCCACTACCATCTGCGTCACATTGCAACAGCCCCAACCAAGCCACAACTTTTGCTGATACAATTACAACCACCATGACCCCCACCAACATCTTCCACACTACTAGTGACTATCTTTTGGATAATTCAGCTTCATTTTTTCTTCAAGGGCAGAGGCCAAATGTGTTCTCTGAGGAGGATGCCGGTAGTCATTTCTGGGAAGCAGAGGACCAGAGACAAAAGTTTCTTCATCCATATGGATTCAGCAACAACTTATGTTCCTTTCATTAA 1002 0.4511 MAAFSYQYHPFLLDPAFFPTPSSPQFHLPQETSFNVTNQETSCVDQSSKITISDNEPSVTKNLSPQSSIVVDKLETGEQVTQKVTPVEKKRRTRNGSSLSNPPSKDTANKKQRKSNGGLKEEEKPKEEKKDQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDLATDLDTLMVRSEKLNSMASPSPPLPSASHCNSPNQATTFADTITTTMTPTNIFHTTSDYLLDNSASFFLQGQRPNVFSEEDAGSHFWEAEDQRQKFLHPYGFSNNLCSFH 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16102g00001 333 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 152 202 IPR011598 GO:0046983
Mupr16102g00001 333 MobiDBLite consensus disorder prediction 107 160 - -
Mupr16102g00001 333 FunFam Basic helix-loop-helix transcription factor 149 221 - -
Mupr16102g00001 333 CDD bHLH_AtBPE_like 142 227 - -
Mupr16102g00001 333 MobiDBLite consensus disorder prediction 74 160 - -
Mupr16102g00001 333 Pfam Helix-loop-helix DNA-binding domain 156 203 IPR011598 GO:0046983
Mupr16102g00001 333 Gene3D - 149 222 IPR036638 GO:0046983
Mupr16102g00001 333 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 150 219 IPR036638 GO:0046983
Mupr16102g00001 333 SMART finulus 158 208 IPR011598 GO:0046983
Mupr16102g00001 333 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 38 262 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16102g00001 Mupr-Chr16102 8211 10755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16102g00001 1 288 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 47.351 8.62e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr16102g00001 HLH 1.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16102g00001 - - gmx:100806696 553.903