Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr160g00006 ATGGCCACTTTTGGCTTTCCTTGCGAAAATTCAAAATTCGGCGGTCCCGTCATCATTGGGGGCGCAAGCTTTCTCTCTCTGCATCTTTTTCTCCCATCATCCTATGCCTCTGTCGGCAAGTTTCTTCTAAGGATTCCTGCGACGATGCCAGATTTGGGGAACCTATCTCTCTCTGCGGCTCTCACACTCTCTCACTGTTCCTCTGATGTCGCTGATGCTCCCGTCAAAACCCTACCCAATGGCTTCGGTTCCGAACCTGCCTTCGAACCTCGGGTTTTGAAGCGCACCCGCGGCTCCCTGGATCGGGTCAAGAAGCCCGCCACTGACAAGTCCTTCCAGGATCGCCTCATAGATCCCTTCTCTCTTCCTTTTCTCGTTGGCGCTCCGAAGATGGGTGAATGTTGTTTTTGCCGCCATTTTATCTACCCTGGGGAGGAGCTCTTGTGTTCTGTTCGCGGATGCGACGCGCGCTACCATTCGGAATGTGCAAAAGAAGCTGTTGGGGCTTCCAGTCTGAAAAAATTCAAGTGTCCACAGCATGTATGCTTCATTTGTAAGCAAAAGAAACACTTGAGGTGTGTGTGTTGTAAAATTGCATTCCATAGTAAATGTGCACCATGGCCAGATGCAGTGCTGCATCTAAAAGATCAACCCGGGCAAGCTGTTTGTTGGAGGCATCCTTCTGATTGGCGCCTGGATGGAAAGAATCTTATACTGTTACTGTTTATTGCTTATACTGCAAATTGCTGGCTGACAGGAATGTTGTATTTGTTGGATGAGCAGCCTGATGCTTCAACAAGTGACATTTCGGAAGTATTTTGTCGCTTGCCTCTTCCTTTTATCAGTGAGGAGTTTAAGATTGATTCCACTTGGAAAGACATGGACAGTAAGATGGAGCAGCCACCACCATATGTACACATAAGACGCATAAAGAAGAAACGTAGTGATGTGGATGATGGTGCAGGGTGCACTAGTTGCAGTTCTACATGTTCTGATGATTGTGTGTGCAGGGTTCAATGCATAAGCTGCTCAAAGGCCTGTCACTGCTCAGAAAATTGCAATAATCGGCCATTTCGCAAGGAGAAAAAGATCAAGATTGTTAAGACTGAACTTTGTGGATGGGGAGTGGAGGCCACCGAAACAATTGATAAAGGTGGATTTATAATTGAGTATATTGGAGAAGTCATTGACGATGCTTTATGTGAAAAAAGGCTTTGGGACATGAAATACAGGGGTGTCCAGAATTTTTACATGTGCGAGATTCGGAAAGACTTCACAATAGATGCAACTTTCAAAGGAAATACTTCACGCTTTTTGAACCATAGCTGTGATCCAAATTGTGTTTTGGAAAAGTGGTTAGTGTCAAATATCGATGGACTCATCCTAGTGCAAGTTGATGGTGAAACACGTGTGGGTGTATTTGCTGCTCGTTCAATTGAAGTTGGAGAATCATTAACATATGATTATAGGATTAACAATGTTGATTACAAATTTGACAGATAA 1503 0.4471 MATFGFPCENSKFGGPVIIGGASFLSLHLFLPSSYASVGKFLLRIPATMPDLGNLSLSAALTLSHCSSDVADAPVKTLPNGFGSEPAFEPRVLKRTRGSLDRVKKPATDKSFQDRLIDPFSLPFLVGAPKMGECCFCRHFIYPGEELLCSVRGCDARYHSECAKEAVGASSLKKFKCPQHVCFICKQKKHLRCVCCKIAFHSKCAPWPDAVLHLKDQPGQAVCWRHPSDWRLDGKNLILLLFIAYTANCWLTGMLYLLDEQPDASTSDISEVFCRLPLPFISEEFKIDSTWKDMDSKMEQPPPYVHIRRIKKKRSDVDDGAGCTSCSSTCSDDCVCRVQCISCSKACHCSENCNNRPFRKEKKIKIVKTELCGWGVEATETIDKGGFIIEYIGEVIDDALCEKRLWDMKYRGVQNFYMCEIRKDFTIDATFKGNTSRFLNHSCDPNCVLEKWLVSNIDGLILVQVDGETRVGVFAARSIEVGESLTYDYRINNVDYKFDR 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr160g00006 500 PANTHER SET DOMAIN PROTEINS 91 493 - -
Mupr160g00006 500 FunFam Histone-lysine N-methyltransferase 280 499 - -
Mupr160g00006 500 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 128 229 IPR013083 -
Mupr160g00006 500 SMART set_7 362 496 IPR001214 GO:0005515
Mupr160g00006 500 ProSiteProfiles AWS domain profile. 319 362 IPR006560 GO:0005634|GO:0042054
Mupr160g00006 500 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 49 490 IPR025787 -
Mupr160g00006 500 Pfam SET domain 373 489 IPR001214 GO:0005515
Mupr160g00006 500 SUPERFAMILY FYVE/PHD zinc finger 118 181 IPR011011 -
Mupr160g00006 500 Gene3D SET domain 277 499 IPR046341 -
Mupr160g00006 500 ProSiteProfiles SET domain profile. 362 490 IPR001214 GO:0005515
Mupr160g00006 500 SUPERFAMILY SET domain 286 493 IPR046341 -
Mupr160g00006 500 SMART PHD_3 133 181 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr160g00006 Mupr-Chr160 11698 24046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr160g00006 343 489 C2H2 Transcription Factor Family AT2G23740 35.000 1.29e-21 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mupr160g00006 SET 2.5e-16 No_clan