Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1609g00009 ATGCCTCTTCTACTAGCACGTGCGCCACCTTCCTCACTCTCACTTCCTCCAATCCCTCACCACCACCGCCACAACAACAATAAGTCTCTAATTGCACTCTCTCACAAGCGCTTCCCCTTCGCCGCAACGCGAATCGCTTTCTTCGCTACCGGGTTCGCTTCCCGCCGCCTTCCCGCGGCCCTGCCTCCCAAGTGCGCCTCCATCAACGGCGTCTCCCTTCAGAACAATCCAGAAGCTTCCGGAGAACTCGAGTTTGTGGAGAGGATTCGAAAATGGCTCGAGCTCGTTCATTCGGTTCTTCCCGGCGGACGGTGGTGGGACTTCTCCGACGGCGTCGACGTTCAGGTCGTGGCGCAGCCGGTGACCGTGTGGCGCGCTCTCCGCAAAATGTGGGATCTTGTTGCGCGTGACAAATGGGTCATTTTCGCCGCGTTCTCTGCTCTCATTGTTGCTGCGGTTTCGGAGATTTCGATACCGCATTTCTTGACGGCATCCATCTTCTCGGCACAGGGTGCGGATCTTACTGTTTTTCATCGGAATGTGCGCGTGTTGGTTCTCTTGTGCGTGACTTCGGGAATATGCAGTGGGTTGCGAGGTTGCTGTTTTGGCATTGCAAACATGATTCTGGTTAAGAGAATGAGGGAAACATTATACTCTTCCCTTCTTCTGCAGGATATATCATTTTTTGACAATGAAACAGTAGGTGACTTGACAAGTAGGCTTGGGGCGGATTGTCAACAAGTGTCAAGGGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTCAGGTTGATTTAGTTGTGATAGATGCAATGCTAGTAAAACTCATCTCACATATTGGAGGTTTTAATTGGGGGGGAGGTTCATTGATCTACTTGTTGATTTTATCATGGCCACTTGGTTTATGTACATTGATGATATGCTCCATATTAGCAGCAGTTATGTTACGTTATGGAAGGTACCAGAAAAAGGCAGCAAGGTTGATCCAAGAAGTCACTGCTTCTGCAAATGATGTAGCTCAAGAGACATTCTCTCTTATTAGAACTGTACGTGTTTATGGAACAGAAGAAGAAGAATACGGAAGGTATAATTGGTGGCTGGGGAAATTAGCTGACATAAGTTTGCGACAAAGTGCTGCATACGGAGTTTGGAATTTTAGCTTTAACACTCTTTATCATTCAACTCAGATTATCGCTGTGCTATTTGGAGGAATGTCTATTCTTGCGGGTCATATCACAGCTGAGAAACTTACCAAGTTTATACTATACAGTGAATGGTTAATTTATTCAACCTGGTGGGTGGGAGACAATATATCCAATTTGATGCAATCAGTTGGGGCTAGTGAAAAAAGGTTAACAGGGCGTATTGAGTTTCTAAATGTATCTTTTCACTATCCTTCAAGGCCAACGGCATCTGTAGTGCAGCATGTAAACTTTGTTGTCCATCCTAGCGAGGTGGTTGCAATAGTTGGACTTAGTGGTAGTGGAAAAAGCACATTGGTGAATCTTTTGCTCCGACTCTATGAGCCTACAAATGGTCAGATTTTGATAGATGGTATCCCTATTAAAGACTTGGACGTCATGTGGTGGAGAGAGAGAATTGGATTTGTGGGCCAGGAACCCAAACTATTCCGGATGGATATTAGTTCAAACATCAAATATGGATGTACTCGAGATGTAAAGCAGGAGGATGTTGAATGGGCTGCAAAGCAGGCCTATGCCCATGACTTTATCTCAGCACTTCCCAATGGTTATGAAACACTTGTTGATGATGATCTATTAAGTGGAGGACAAAAGCAGCGAATTGCTATTGCTAGGGCGATTATTAGGGACCCAAAAATATTGATCCTTGATGAAGCTACTAGTGCACTAGATGCTGAAAGTGAACATAATGTCAAGGGTGTTCTTCGATCTGTAAGAAGTGATTCTGCAGCCAGAAGTGTCATAGTCATTGCTCACAGTGTCATAGTCATTGCTTACAGGCTTTCTACCATACAAGCAGCTGACAGGATTGTGGTGATGGATGGTGGTCAAATTGTTGAGATTGGAAGTCACAGGGAACTTCTCTTAAAAGATGGTTTGTATGCACGGTTAACTAGAAAACAGGCTGATGCCATGGCATGA 2130 0.4502 MPLLLARAPPSSLSLPPIPHHHRHNNNKSLIALSHKRFPFAATRIAFFATGFASRRLPAALPPKCASINGVSLQNNPEASGELEFVERIRKWLELVHSVLPGGRWWDFSDGVDVQVVAQPVTVWRALRKMWDLVARDKWVIFAAFSALIVAAVSEISIPHFLTASIFSAQGADLTVFHRNVRVLVLLCVTSGICSGLRGCCFGIANMILVKRMRETLYSSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQVDLVVIDAMLVKLISHIGGFNWGGGSLIYLLILSWPLGLCTLMICSILAAVMLRYGRYQKKAARLIQEVTASANDVAQETFSLIRTVRVYGTEEEEYGRYNWWLGKLADISLRQSAAYGVWNFSFNTLYHSTQIIAVLFGGMSILAGHITAEKLTKFILYSEWLIYSTWWVGDNISNLMQSVGASEKRLTGRIEFLNVSFHYPSRPTASVVQHVNFVVHPSEVVAIVGLSGSGKSTLVNLLLRLYEPTNGQILIDGIPIKDLDVMWWRERIGFVGQEPKLFRMDISSNIKYGCTRDVKQEDVEWAAKQAYAHDFISALPNGYETLVDDDLLSGGQKQRIAIARAIIRDPKILILDEATSALDAESEHNVKGVLRSVRSDSAARSVIVIAHSVIVIAYRLSTIQAADRIVVMDGGQIVEIGSHRELLLKDGLYARLTRKQADAMA 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1609g00009 709 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 458 703 IPR003439 GO:0005524
Mupr1609g00009 709 SMART AAA_5 485 680 IPR003593 GO:0016887
Mupr1609g00009 709 Pfam ABC transporter transmembrane region 143 266 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr1609g00009 709 Pfam ABC transporter transmembrane region 290 430 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr1609g00009 709 ProSitePatterns ABC transporters family signature. 596 610 IPR017871 GO:0005524|GO:0016887
Mupr1609g00009 709 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 142 445 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr1609g00009 709 MobiDBLite consensus disorder prediction 1 21 - -
Mupr1609g00009 709 SUPERFAMILY ABC transporter transmembrane region 128 443 IPR036640 GO:0005524|GO:0016020
Mupr1609g00009 709 Gene3D - 452 708 IPR027417 -
Mupr1609g00009 709 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 453 704 IPR027417 -
Mupr1609g00009 709 CDD ABC_6TM_TAP 144 452 - -
Mupr1609g00009 709 Gene3D ABC transporter type 1, transmembrane domain 123 451 IPR036640 GO:0005524|GO:0016020
Mupr1609g00009 709 PANTHER ABC TRANSPORTER B FAMILY 134 701 IPR039421 -
Mupr1609g00009 709 Pfam ABC transporter 477 624 IPR003439 GO:0005524
Mupr1609g00009 709 FunFam Multidrug ABC transporter ATP-binding protein 450 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1609g00009 Mupr-Chr1609 83926 90798 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1609g00009 212 707 Calmodulin-binding Proteins AT2G36910 32.190 1.91e-63 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1609g00009 - - gmx:100775951 1082.78