Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1609g00008 ATGACGACCCGATTCAAGAAGAACCGGAAGAAGCGGGGGCACGTGAGCGCCGGTCACGGCCGCATCGGAAAACACCGTAAGCACCCAGGCGGTCGTGGAAACGCCGGAGGCATGCACCACCACCGCATCCTGTTCGACAAGTATCACCCTGGTTACTTCGGAAAGGTGGGTATGCGGTACTTCCACAAACTCCGCAACAAGTTCCACTGCCCCATCGTCAACGTGGACAAGCTCTGGTCTCTGCTGCCCCAGGACGCCAAGGACAAAGCCCTTCAATCCAAGGACACTGCCCCTCTGCTCGACGTCACGCAGCTCGGGTACTTTAAGGTTCTCGGAAAAGGCGTGCTACCCCCAAATCAACCCATTGTCGTCAAGGCCAAACTCATTTCCAAGATCGCCGAGAAGAAGATTAAGGAAGCCGGTGGCGCTCTGGTGTGTTTGGATAATCAG 450 0.5644 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFHCPIVNVDKLWSLLPQDAKDKALQSKDTAPLLDVTQLGYFKVLGKGVLPPNQPIVVKAKLISKIAEKKIKEAGGALVCLDNQ 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1609g00008 150 Hamap 50S ribosomal protein L15 [rplO]. 1 147 IPR030878 GO:0003735|GO:0006412|GO:0015934
Mupr1609g00008 150 FunFam 60S ribosomal protein L27a 58 148 - -
Mupr1609g00008 150 ProSitePatterns Ribosomal protein L15 signature. 109 141 IPR001196 GO:0003735|GO:0005840|GO:0006412
Mupr1609g00008 150 Gene3D - 58 147 - -
Mupr1609g00008 150 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 IPR021131 -
Mupr1609g00008 150 SUPERFAMILY Ribosomal proteins L15p and L18e 6 147 IPR036227 -
Mupr1609g00008 150 PANTHER 60S RIBOSOMAL PROTEIN L27A 1 145 - -
Mupr1609g00008 150 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1609g00008 Mupr-Chr1609 81911 82495 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1609g00008 1 145 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 85.517 8.28e-88 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1609g00008 K02900 - gmx:100817971 268.47