Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16078g00002 ATGTCTCTTCTCAAGGTTGTAGCAGTGGTGTTTTTGCTGGCAACAATAGTAGCCAGTGATGACACCAGTTTCACCTATAACGGGTTCCAAGCATCTAATTTGTACCTTGATGGCAGTGCTGAGTTCACCTCCACTGGCATGCTCAAACTCACCAACCACACCAAGCAACAAAAGGGTCATGCTTTCTTCCCAAGTCCAATAGTCTTCAAAAATGGTAGTGCTTTTTCTTTCTCCACCACTTTTGTGTTTGCCATAAGATCTGAGTACCCCAATTTGAGTGGTCATGGGATTGTTTTTGTGGTTTCTCCAACTAAAGATTTTCAGCATTCTCTACCAAGCCAGTACCTTGGCCTCTTTAATGAGACCAACAACAGCAACGGTGTTTTTGGTGTGGAACTTGATACCATTCTGAACGCCGAGTTTGATGATATCAATGACAACCATGTTGGAATTGATGTGAATGATTTGAAGTCGGTTAAATCAGCTTCTGCAGGGTATTACACCGATGGGGGGTTTAAGAATTTGAGCCTCATCAGTGGCTACCCAATGCAGGCATGGGTGGAATATGATGGCCTAAAGAAGCAGATTGATGTTACTTTAGCTCCAATCAACATTGGTAAACCAGAACGCCCTTTGTTATCATTGAGCAAAGATCTTTCTCCAATTCTTGACACTAGCATGTATGTTGGATTCTCATCCTCAACTGGGTCAATCCGAAGTTCCCATTATGTTTTGGGTTGGAGCTTTAAGGTGAATGGCCAGGCTCAACAACTTGCAATCTCTGAACTCCCCAAGCTACCTAGACTAGATAGTAAACAAGAGTCTAAGGTTCTCATTGTTGTGTTGCCTTTGATATCACTCAGTTTGGTCCTCATGGTGGCTCTGGCAGTGGTTCATGTCATCAAAAGGAAGAAGTTCGCGGAGCTGCTTGAAGATTGGGAGCAAGACTATGGTCCTCATAGGTTCAAGTACAAGGATCTTAGCATGGCAACAAAGGGGTTCAGGGAGAAGGAGCTGTTGGGGAGTGGTGGATTTGGAAGAGTCTACAAAGGGGTGATGCCAATTTCCAAAATTGAGGTTGCAGTGAAGAAGGTGTCCCATGAGTCAAGACAAGGGATGAGGGAATTTGTGGCAGAAATAGTTAGCATTGGTAGACTTAGGCACAGGAATTTGGTTCCCCTTCTGGGGTATTGCAGGCGCAAAGGAGAGTTGCTATTGGTCTATGACTACATGCCAAATGGAAGCCTTGACAAGTATCTCTATAACCAACCAAGAGTGACCCTGAATTGGAGCCAGAGATTTAGAATCACCAAAGGGGTTGCTTCAGGTTTGTTTTATCTACATGAGGAATGGGAGCAAGTTGTGGTCCATAGAGACATTAAGGCTAGCAATGTGCTACTAGATGCTGAGTTGAATGGAAGATTAGGGGACTTTGGTCTTTCAAGGTTGTATGAGCATGGAACTGATCCTCACACTACTCATGTTGTTGGAACTCTTGGGTATCTGGCCCCTGAGCATACTAGAACAGGTAAGGCAACTAAAAATTCTGATGTGTTTGCTTTTGGTGCATTTTTGCTAGAGGTTGTTTGTGGAAGGAGGCCAATAGAGCAAGTAAGGGAATCAGGGAGTGAAATTCTGGTTGATTGGGTGTACAATTGTTGGAAAAGGGGTGAGATTCTTGAGGCAAGGGATAAAAACTTGGGCACAAATTATAGGGCAGAGGAGGTGGAGTTGGTGTTGAAACTTGCTTTATTATGCTCACATTCTGACCCTTTGGCTAGGCCAAGCATGCGCCAGGTTGTGCAATACTTGGAGAGGGAGGTGCCTCTGCCAGATTTGTCTTTGCTTAGCTTAACTTCCACTGGATTGAATTTTGGCCTCCATGAAGACTTTCACGACTGTCCAATGTCTTATCCTTCATCTATGGATAGGCCACTCTCTCATACTTCTTCAATTGCTGAATCACTTCTCTCTGGGGGTCGTTGA 1986 0.4421 MSLLKVVAVVFLLATIVASDDTSFTYNGFQASNLYLDGSAEFTSTGMLKLTNHTKQQKGHAFFPSPIVFKNGSAFSFSTTFVFAIRSEYPNLSGHGIVFVVSPTKDFQHSLPSQYLGLFNETNNSNGVFGVELDTILNAEFDDINDNHVGIDVNDLKSVKSASAGYYTDGGFKNLSLISGYPMQAWVEYDGLKKQIDVTLAPINIGKPERPLLSLSKDLSPILDTSMYVGFSSSTGSIRSSHYVLGWSFKVNGQAQQLAISELPKLPRLDSKQESKVLIVVLPLISLSLVLMVALAVVHVIKRKKFAELLEDWEQDYGPHRFKYKDLSMATKGFREKELLGSGGFGRVYKGVMPISKIEVAVKKVSHESRQGMREFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPRVTLNWSQRFRITKGVASGLFYLHEEWEQVVVHRDIKASNVLLDAELNGRLGDFGLSRLYEHGTDPHTTHVVGTLGYLAPEHTRTGKATKNSDVFAFGAFLLEVVCGRRPIEQVRESGSEILVDWVYNCWKRGEILEARDKNLGTNYRAEEVELVLKLALLCSHSDPLARPSMRQVVQYLEREVPLPDLSLLSLTSTGLNFGLHEDFHDCPMSYPSSMDRPLSHTSSIAESLLSGGR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16078g00002 661 Gene3D - 19 266 - -
Mupr16078g00002 661 Gene3D Phosphorylase Kinase; domain 1 319 410 - -
Mupr16078g00002 661 ProSitePatterns Protein kinases ATP-binding region signature. 340 364 IPR017441 GO:0005524
Mupr16078g00002 661 Gene3D Transferase(Phosphotransferase) domain 1 411 616 - -
Mupr16078g00002 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 269 IPR013320 -
Mupr16078g00002 661 FunFam Lectin-domain containing receptor kinase A4.3 319 410 - -
Mupr16078g00002 661 SUPERFAMILY Protein kinase-like (PK-like) 315 615 IPR011009 -
Mupr16078g00002 661 CDD STKc_IRAK 340 606 - -
Mupr16078g00002 661 SMART serkin_6 334 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16078g00002 661 Pfam Protein kinase domain 334 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16078g00002 661 ProSiteProfiles Protein kinase domain profile. 334 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16078g00002 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Mupr16078g00002 661 FunFam L-type lectin-domain containing receptor kinase S.4 411 617 - -
Mupr16078g00002 661 Pfam Legume lectin domain 22 264 IPR001220 GO:0030246
Mupr16078g00002 661 FunFam L-type lectin-domain containing receptor kinase V.9 21 256 - -
Mupr16078g00002 661 CDD lectin_legume_LecRK_Arcelin_ConA 22 253 IPR001220 GO:0030246
Mupr16078g00002 661 PANTHER - 29 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16078g00002 Mupr-Chr16078 23251 25236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16078g00002 18 661 Receptor kinase-like Gene Family AT2G37710 62.748 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mupr16078g00002 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16078g00002 - - gmx:100802293 1140.95