Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16078g00001 ATGCTCCTTTTGATCCAAGTGTCATCCCAGGTTGACCAGCTTCTCTATGCTGGATTCAAGGATGTGGGTGCCAGCAACCTAACCTTGAATGGGATTGCAGAAATAGAGAAAAATGGAATACTCAAATTGACAAATGAGACCAGCAGGTTAATGGGTCATGCCTTTTACCCATCTCCTTTTCAGTTAAAGAACTCCACAACTGGTAAAGTTTTCTCCTTTTCTTCCTCCTTTGCTCTGGCTATTGTCCCTGAGTACCCCAAGCTAGGTGGCCATGGCATGGCTTTCACAATAGCAAACACTAAGGATCTCAAGGCTCTTCCCAGCCAGTACCTTGGTCTCCTCAACTCCAGTGACAATGGTAACTTCTCCAACCACATCTTTGCTGTTGAGTTTGACACTGTGCAAGACTTTGAGTTTGGGGACATCAATGACAACCATGTTGGAATAGACATCAATAGCATGCAGTCCAATGCATCTGCTAACGTTAGTTCAGTGGGTCTCAATCTCAAAGGTGGGAGTCCCATTCTAGCTTGGGTTGATTATGATTCTCAATTGAATCTTGTCAATGTTTCACTTTCTGCAACTTCATCCAAACCCAAAACTCCAATATTATCCTTCAATGTGGATCTCTCACCAATTCTTAATGACACTATGTATGTTGGGTTCTCTGCTTCAACGGGTTTGCTTGCTAGCTCCCACTACATCTTGGGTTGGAGCTTCAAAATCAATGGACCAGCACCACCCCTTGATCTAACTTCTCTACCACAACTTCCAAAGCCAAAGAAGAAACATACATCTCTCATAACTGGGCTTTCAGTCTCGGTTGTTGTTATTGTGCTATTAGCCATCTCCATTGGCTTTTACTTGTACAGAAAAATGAAGAACGCTGATGTGATAGAAGCATGGGAGCTTGAAATTGGGCCACATAGGTACTCCTACCAAGAGCTTAAAAAGGCCACCAAAGGCTTCAAGGACAAAGAGCTTCTTGGGCAGGGTGGTTTTGGCAGGGTTTACAAAGGAACATTGCCGAATTCCAAGATCCAAGTGGCGGTTAAGCGAGTTTCGCATGAATCCAAGCAAGGCCTGAGGGAATTCGTGTCAGAGATCGCCAGCATAGGCCGGCTTCGGCACCGGAATTTGGTTCAATTACTTGGCTGGTGCCGCCGGCGAGGTGACCTCCTGCTTGTGTATGATTTCATGGCCAATGGGAGCCTGGACAAGTACTTGTTTGAAGGGCCAAAGATGGTGCTAAGTTGGGAGCATAGGTTCAAGATCATAAAGGGTGTTGCTTCAGCTCTTTTGTATCTGCATGAAGGGTATGAGCAGGTGGTGATACATAGAGATGTGAAGGCCAGCAATGTGCTGCTAGATTTTGAGCTTAATGGAAAGCTAGGTGATTTTGGGTTGGCAAGGTTGTATGAACATGGGGCTAACCCTGGCACCACAAAAGTGGTGGGAACATTAGGCTATTTGGCTCCTGAGTTGCCTAGAACAGGAAAAGCAACTACAAGCTCAGATGTTTTTGCATTTGGAGCACTTTTGCTTGAGGTGGCTTGTGGGCGCAGGCCAATTGAGCCTAAGGCATTGCCAGAAGAGTTGGTGTTGGTGGATTGGGTGTGGGACAAGTACAAACAAGGGAGAATACTTGATGTGGTGGACCCAAAACTAAATGGTCATTTTGATGAGAAGGAGGTGTTGGTGGTGCTGAAATTGGGGTTGATGAGTTCAAATGATGTGCCTGCTGCTAGGCCTAGCATGAGGCAAGTGGTGAGGTATTTGGATGGGGAAGTTGAGTTGCCAGAGGACTTGAGAAAGCCAGGGGATTTAAGTCAACAGGAGGGGTTTGATGAGTTTTTGCACTCACTTGCATCTTCTTCCTTTGATAAGATGAGCTCAAGCTCCAATTTTGGAAATAGAGACATGGATTCTAGTTTTCTTTCCTTTGCCAATTCACCTCATTCCCTTCTCCATGGTAGAGGGGAAACTAGGTGA 1992 0.4553 MLLLIQVSSQVDQLLYAGFKDVGASNLTLNGIAEIEKNGILKLTNETSRLMGHAFYPSPFQLKNSTTGKVFSFSSSFALAIVPEYPKLGGHGMAFTIANTKDLKALPSQYLGLLNSSDNGNFSNHIFAVEFDTVQDFEFGDINDNHVGIDINSMQSNASANVSSVGLNLKGGSPILAWVDYDSQLNLVNVSLSATSSKPKTPILSFNVDLSPILNDTMYVGFSASTGLLASSHYILGWSFKINGPAPPLDLTSLPQLPKPKKKHTSLITGLSVSVVVIVLLAISIGFYLYRKMKNADVIEAWELEIGPHRYSYQELKKATKGFKDKELLGQGGFGRVYKGTLPNSKIQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFEGPKMVLSWEHRFKIIKGVASALLYLHEGYEQVVIHRDVKASNVLLDFELNGKLGDFGLARLYEHGANPGTTKVVGTLGYLAPELPRTGKATTSSDVFAFGALLLEVACGRRPIEPKALPEELVLVDWVWDKYKQGRILDVVDPKLNGHFDEKEVLVVLKLGLMSSNDVPAARPSMRQVVRYLDGEVELPEDLRKPGDLSQQEGFDEFLHSLASSSFDKMSSSSNFGNRDMDSSFLSFANSPHSLLHGRGETR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16078g00001 663 Pfam Protein kinase domain 323 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16078g00001 663 ProSiteProfiles Protein kinase domain profile. 323 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16078g00001 663 SUPERFAMILY Protein kinase-like (PK-like) 305 609 IPR011009 -
Mupr16078g00001 663 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 263 IPR013320 -
Mupr16078g00001 663 Pfam Legume lectin domain 14 254 IPR001220 GO:0030246
Mupr16078g00001 663 PANTHER - 30 600 - -
Mupr16078g00001 663 ProSitePatterns Protein kinases ATP-binding region signature. 329 352 IPR017441 GO:0005524
Mupr16078g00001 663 Gene3D Transferase(Phosphotransferase) domain 1 400 606 - -
Mupr16078g00001 663 FunFam L-type lectin-domain containing receptor kinase S.4 10 248 - -
Mupr16078g00001 663 CDD lectin_legume_LecRK_Arcelin_ConA 13 244 IPR001220 GO:0030246
Mupr16078g00001 663 FunFam Lectin-domain containing receptor kinase A4.3 308 399 - -
Mupr16078g00001 663 SMART serkin_6 323 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16078g00001 663 FunFam L-type lectin-domain containing receptor kinase S.4 400 606 - -
Mupr16078g00001 663 CDD STKc_IRAK 329 595 - -
Mupr16078g00001 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Mupr16078g00001 663 Gene3D - 13 243 - -
Mupr16078g00001 663 Gene3D Phosphorylase Kinase; domain 1 308 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16078g00001 Mupr-Chr16078 4629 6620 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16078g00001 7 649 Receptor kinase-like Gene Family AT3G55550 59.394 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mupr16078g00001 Lectin_legB 1.8e-77 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16078g00001 - - gmx:100784346 1185.63