Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16068g00001 ATGGAACTGGCTTTGAGCTTGGGAGACACCTCCAAGCCCTTTACTTTACCCACAAAAGACACTCCAGGCTTCTGCGGGAGAGGCTCCGACGACAAAAGAAGCGACGCTGCTGAGAGAAAAGGTTCCTCAGATCCACCCGTGCAACTCGACCTTCTTCCTTTCACTCCTGTTCTCAGATCCCAACCTCCTTCCAACCTTCGAATTCCGTGGCTCACTCAACCATGTGGGGCGGCCAGGGCGCTGGACGTGAACCTTTTTCCGGCAGCGGTGGAGGACGGCGACGACGGTACATCGCTGTCGTCGCCCAACAGTGCGGTGTCGCCGTTTCAGATGGATTTCAGCATGAGGAACGGTAATGCTGCCGAGTTTGGAGGCAGAAACAAGAGGGAACAGAACGACGGCGAGGGCGAGAGAGCGAGTGACGACGATGAAAACGGTTCAACTCGGAAGAAACTCAGACTCACTAAGGAACAATCGGCTTTTCTCGAAGAGAGCTTCAAAGAACACACCACTCTCAATCCCAAGCAGAAACTTGCTTTGGCAAAACAGTTGAATCTCCGTCCTCGTCAAGTGGAGGTTTGGTTTCAGAATAGAAGGGCAAGGACAAAGTTGAAGCAAACTGAAGTGGATTGTGAGTATTTAAAGAGATGCTGCGAGACCCTAACAGAAGAGAATAGAAGGTTGCAGAAGGAACTTCAAGAACTTAGAGCGTTGAAAACTTCACAACCATTCTACATGCAGCTTCCAGCCACCACTCTCACCATGTGTCCCTCTTGCGAAAGGGTTGCCACAAATTCCACCACCGCTAACCAAACCTCCACCGTTAACATTAACAACAACGCTTCTCAAATCCCGGTGGAGTTGTCTCTCAGCAAACCCAGGATATTACCCTTCCCTAATGCCCAGGCCCAATCACCCAAGGCCCAAGCCCATCAGATAGCCTCTTCATGA 951 0.511 MELALSLGDTSKPFTLPTKDTPGFCGRGSDDKRSDAAERKGSSDPPVQLDLLPFTPVLRSQPPSNLRIPWLTQPCGAARALDVNLFPAAVEDGDDGTSLSSPNSAVSPFQMDFSMRNGNAAEFGGRNKREQNDGEGERASDDDENGSTRKKLRLTKEQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATNSTTANQTSTVNINNNASQIPVELSLSKPRILPFPNAQAQSPKAQAHQIASS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16068g00001 316 FunFam Homeobox-leucine zipper protein 18 135 210 - -
Mupr16068g00001 316 SUPERFAMILY Homeodomain-like 142 206 IPR009057 -
Mupr16068g00001 316 Gene3D - 141 210 - -
Mupr16068g00001 316 ProSitePatterns 'Homeobox' domain signature. 180 203 IPR017970 GO:0000981|GO:0006355
Mupr16068g00001 316 Coils Coil 211 241 - -
Mupr16068g00001 316 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 37 276 - -
Mupr16068g00001 316 ProSiteProfiles 'Homeobox' domain profile. 145 205 IPR001356 GO:0003677
Mupr16068g00001 316 CDD bZIP 198 237 - -
Mupr16068g00001 316 CDD homeodomain 149 206 IPR001356 GO:0003677
Mupr16068g00001 316 MobiDBLite consensus disorder prediction 126 150 - -
Mupr16068g00001 316 MobiDBLite consensus disorder prediction 25 40 - -
Mupr16068g00001 316 MobiDBLite consensus disorder prediction 297 316 - -
Mupr16068g00001 316 SMART halz 205 248 IPR003106 GO:0006355|GO:0043565
Mupr16068g00001 316 Pfam Homeobox associated leucine zipper 205 239 IPR003106 GO:0006355|GO:0043565
Mupr16068g00001 316 MobiDBLite consensus disorder prediction 1 65 - -
Mupr16068g00001 316 MobiDBLite consensus disorder prediction 302 316 - -
Mupr16068g00001 316 MobiDBLite consensus disorder prediction 116 150 - -
Mupr16068g00001 316 SMART HOX_1 147 209 IPR001356 GO:0003677
Mupr16068g00001 316 Pfam Homeodomain 149 203 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16068g00001 Mupr-Chr16068 1033 2395 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16068g00001 46 278 Homeobox Transcription Factor Family AT5G47370 54.472 9.97e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr16068g00001 Homeodomain 1.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16068g00001 K09338 - gmx:100776113 483.796