Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16048g00001 ATGGGGAGAGCAATGAGGTGGTTGAAGGGGTTGTTTGGGATAAAGAGAGACAGAGAGCGCAAAGAGAATTCAAATCAGGGCACAAAATGGTGTCACTCAGACAGAGATTCCAGAGGTTTATGTCATAATCCAACCACCATTCCACCCAATATTTCACCTGCAGAGGCCGCTTGGCTGCAATCCTTCTACTCGGAAACTGAGAAGGAGCAGAACAAGCATGCCATTGCAGTTGCCGCAGCCACTGCAGCCGCTGCAGACGCTGCCGTGGCTGCGGCTCAAGCTGCCGTGGCGGTGGTTAGATTAACTAGCCAAGGCAACGGCAGAGACACCATGTTTGGCGGTGGACAGGAAAAGTTGGCTGTTGTCAAGATTCAAACTGTGTTTAGAGGATACTTGGCAAGAAAGGCATTGAGAGCCCTAAAAGGATTGGTGAAGTTACAAGCACTTGTGAGAGGGTACTTGGTGCGGAAGCAAGCAGCAGCAACCCTGCATGGTATGCAGGCTCTAATTAGAGCTCAAGCGACAGTAAGGTCTAAGAAACGTGGAGGACTCACGAGCACAAAGGATGAAGCACATAGGTTTCAGACACAAGCGCGAAGATCTATGGAGAGATTTGATGACATAAAGAGTGAGTACATAGCTCCCATCCACAGCAGAAGGCTATCATCTTCCTTTGATGCCACAATGAATAGTGTTGATGGGAGCCCCAAAATAGTTGAAGTGGACACTGGCAGGCCAAAGTCAAGGTCCCGCAGGAGCAACACCTCAATGTCAGATTTTGGCGATGACCCATCATTTCAGGCACTTCCTTCTCCTCTCCCATTCTCTCATTTGTCCATACCAAACCACAGGAATTTCCATGACTCGGAATGGGGCTTAACGGGAGAAGAGTGCAGGTTCTCCACAGCACAAAGCACTCCACGCTTCACCAACTCTTGTAGTTGTGGATCTGTTGTTGTTGCACCTATGACACCTAAAAGTGTTTGCACAGATAACTTGTTCCTTGGGCACTACCACAATTTCCCAAACTACATGGCCAGCACTCAGTCTTTCAAGGCCAAATTGAGGTCTCATAGTGCTCCCAAGCAACGCCCTGATCCAGGGCCAAAGAAGAGGCTTTCCCTCAATGAGATGATGGAGTCTAGGAGTAGTTTAAGTGAGGCTAGAATGCAAAGGTCTTGCTCACAGATTCAAGAAGCTATCAATTTTAAGAATGCTGTCATGAGTAAGCTTCAAAAGTCCACAGAATTTGGTAGGGAGACTCAGAGAGACACTCAATTTTCCAACCAGAGGAGAGGTGTAAACTACAGCTTGAGTTGTAAGCCAAAAGTACATTGGGTGCCTCTAAACAGTGAAGCAACATAA 1365 0.4762 MGRAMRWLKGLFGIKRDRERKENSNQGTKWCHSDRDSRGLCHNPTTIPPNISPAEAAWLQSFYSETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGNGRDTMFGGGQEKLAVVKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQAAATLHGMQALIRAQATVRSKKRGGLTSTKDEAHRFQTQARRSMERFDDIKSEYIAPIHSRRLSSSFDATMNSVDGSPKIVEVDTGRPKSRSRRSNTSMSDFGDDPSFQALPSPLPFSHLSIPNHRNFHDSEWGLTGEECRFSTAQSTPRFTNSCSCGSVVVAPMTPKSVCTDNLFLGHYHNFPNYMASTQSFKAKLRSHSAPKQRPDPGPKKRLSLNEMMESRSSLSEARMQRSCSQIQEAINFKNAVMSKLQKSTEFGRETQRDTQFSNQRRGVNYSLSCKPKVHWVPLNSEAT 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16048g00001 454 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Mupr16048g00001 454 MobiDBLite consensus disorder prediction 352 380 - -
Mupr16048g00001 454 Pfam Protein of unknown function (DUF4005) 321 393 IPR025064 -
Mupr16048g00001 454 MobiDBLite consensus disorder prediction 234 264 - -
Mupr16048g00001 454 Gene3D - 116 169 - -
Mupr16048g00001 454 SMART iq_5 116 138 IPR000048 GO:0005515
Mupr16048g00001 454 SMART iq_5 139 160 IPR000048 GO:0005515
Mupr16048g00001 454 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Mupr16048g00001 454 MobiDBLite consensus disorder prediction 179 200 - -
Mupr16048g00001 454 PANTHER IQ-DOMAIN 5-RELATED 1 382 - -
Mupr16048g00001 454 MobiDBLite consensus disorder prediction 182 200 - -
Mupr16048g00001 454 MobiDBLite consensus disorder prediction 359 377 - -
Mupr16048g00001 454 Pfam IQ calmodulin-binding motif 144 158 IPR000048 GO:0005515
Mupr16048g00001 454 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16048g00001 Mupr-Chr16048 3568 6082 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16048g00001 1 390 IQD Protein Family AT3G16490 52.632 8.93e-97 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16048g00001 - - gmx:100800892 658.677