Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16039g00002 ATGGACATGCTTGCTTTTCTTACGCTAATCACTTTTCATGTTTTGTTTCCCTCAACAGTGTCCGATACCTTGTCACGGAGAGTGACGATAACAACGGTGGGAAAGAACCAAAACGTCCAAGCTGAGGGAACTAGCCCATCCGGGATCAATGATGATAGCTATTGTAGCTATCATAGAGTTTGTGGATCCAATGGGAATTGTGACCTGAATAGAGCACCAGCTTGTGTGTGTATAGAAGGATTCACACCAAAGTCACAGAGTGGGTGGGACTCCATGGACTACACACAGGGATGTGTGCGTAAAAAAGCATTGAATTGTACAACAGATGGCTTTGTCAAATATGGTGTGTTTCAAGAACCCAGTGGCACATATTTTTTGTTGAACCAAAGTTTGGGAGAGGATGGTTGCAAAGAAAGATGCTTTAGTAACTGCTCTTGTGTGGCTTATACCACTACGGGGAGTGGTTGCAAATTGTGGAGTGGTGATTTGTTTGATGTTAGAGTCATCAACGGAGGAGGGAAGGATTTGTATATTCGAATGCCAGCTTCAGAGATAGGCGATAAAGAGGAAAATAGCGGGCATGGTGAGGGGAAGATAGTATGGGTAACAATTGGGAGTGCTGTTGCTATAGTTTCTGGGATGATCATTGGTTTCTGTTATTATATGCACAGAAGGAGGACAAATTTAGAAGGTAGATTGCTCGTGTATTTCATGCTGAGTGCTGATGACGTTTACATTTTGACTACTGAGACAGTTAGTCATATCAATGAACATGAAGATATGGAGCTTCCACTATTTGACCTATCAAGAATAGCTGTTGCCACTGATAACTTCTCAGTAAACAATAAGCTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGTACATTAGACGACGGGACACAAATAGCTGTTAAGAGGCTCTCAACTAGTTCAGGGCAGGGGCTAAATGAATTCAAAAATGAAGTAATATTAATAGCCAAGCTTCAGCACCGTAATCTTGTAAGGCTTCTTGGATGCTGCATCCAAAACCAGGAAAAATTGCTGATTTATGAATACATGCCTAACGGAAGCCTAGATTATTTTATTTTTGATGAAACACGAGGAGAACTCTTGGATTGGCCTAAGCGCTTTAACATCATTTGTGGGATTGCTAGGGGCTTGTTATATCTTCATCAGGATTCTAGGCTGAGAATTATACATAGAGATCTCAAAGCAAGTAATGTTTTGCTTGATAGTGAGATGAACCCAAAAATCTCAGACTTTGGTTTGGCTAAAAGTTTTGGAGGAGATCAGAGTAGAGGAAACACAAAAAGAGTATTTGCTGAACAATCTGTGGTGTTTGCTTTGTTCCCCTACAGTGGATATATGGCTCCAGAATACGCTGTTAATGGACACTTTTCAGTGAAATCAGATGTCTTTAGCTTTGGGATTTTGCTGCTTGAGATAATAACTGGGAAGAAAAATAGACGGTTCTATTATCCAAATGACAATATCAACCTATTTGGACATGCATGGACTTTATGGGAGCAACAAAGACCCTTAGAACTGATTGATGAATGCCTCAAGGAATCATGTGCTTTGTCTGAAGTACAACGCTGCATCCATATCAGCCTCCTGTGTGCACAGCAGCATCCAGAGGACAGGCCAAGCATGTCAAATGTAGTTCTGATGTTGGGTAGTGAAATTGAATTGGCCCAACCCAAAATTCCTACTTTTCTCATAGGAGAACCTTCTGATGGCAAAAGTTCCTCCTGTAGTAAAAATGAATTGAGTATTACAGTGCTGGATGCTAGATAA 1800 0.41 MDMLAFLTLITFHVLFPSTVSDTLSRRVTITTVGKNQNVQAEGTSPSGINDDSYCSYHRVCGSNGNCDLNRAPACVCIEGFTPKSQSGWDSMDYTQGCVRKKALNCTTDGFVKYGVFQEPSGTYFLLNQSLGEDGCKERCFSNCSCVAYTTTGSGCKLWSGDLFDVRVINGGGKDLYIRMPASEIGDKEENSGHGEGKIVWVTIGSAVAIVSGMIIGFCYYMHRRRTNLEGRLLVYFMLSADDVYILTTETVSHINEHEDMELPLFDLSRIAVATDNFSVNNKLGEGGFGPVYKGTLDDGTQIAVKRLSTSSGQGLNEFKNEVILIAKLQHRNLVRLLGCCIQNQEKLLIYEYMPNGSLDYFIFDETRGELLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDSEMNPKISDFGLAKSFGGDQSRGNTKRVFAEQSVVFALFPYSGYMAPEYAVNGHFSVKSDVFSFGILLLEIITGKKNRRFYYPNDNINLFGHAWTLWEQQRPLELIDECLKESCALSEVQRCIHISLLCAQQHPEDRPSMSNVVLMLGSEIELAQPKIPTFLIGEPSDGKSSSCSKNELSITVLDAR 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16039g00002 599 SMART ntp_6 106 180 IPR003609 -
Mupr16039g00002 599 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 354 567 - -
Mupr16039g00002 599 CDD STKc_IRAK 284 559 - -
Mupr16039g00002 599 ProSiteProfiles PAN/Apple domain profile. 106 181 IPR003609 -
Mupr16039g00002 599 Pfam PAN-like domain 106 166 IPR003609 -
Mupr16039g00002 599 Pfam S-locus glycoprotein domain 27 85 IPR000858 GO:0048544
Mupr16039g00002 599 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 55 582 - -
Mupr16039g00002 599 ProSiteProfiles Protein kinase domain profile. 278 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16039g00002 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 399 411 IPR008271 GO:0004672|GO:0006468
Mupr16039g00002 599 Gene3D Phosphorylase Kinase; domain 1 252 353 - -
Mupr16039g00002 599 Pfam Protein tyrosine and serine/threonine kinase 280 557 IPR001245 GO:0004672|GO:0006468
Mupr16039g00002 599 SUPERFAMILY Protein kinase-like (PK-like) 261 559 IPR011009 -
Mupr16039g00002 599 Gene3D Transferase(Phosphotransferase) domain 1 354 569 - -
Mupr16039g00002 599 SMART serkin_6 278 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr16039g00002 599 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 244 353 - -
Mupr16039g00002 599 CDD PAN_AP_plant 104 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16039g00002 Mupr-Chr16039 9710 12759 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16039g00002 190 574 Receptor kinase-like Gene Family AT4G23190 48.329 5.31e-123 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr16039g00002 PK_Tyr_Ser-Thr 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16039g00002 - - adu:107462470 723.391