Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr16036g00001 ATGCCTTGGTATAAGCCATCTAACGAGAGAAAAGATGAGGATGTGAAGATTGAAGCTGGTGTGGATCTAAAGGTGATCATAGAGGAACTGGAACCAATCGATGTGCCTTGTGTGTTCATATGCCCAATCTCCCTGGAACCAATGCAAGATCCCGTTACCCTTTGCACCGGTCAAACCTACGACAGATCCAACATCCTCAAATGGTTCTCCCTCGGTCACAAAACCTGTCCCACCACAATGCAAGAGCTTTGGGACGATGCTGTCACTCCCAACACCACCCTCTCCCACTTGATCCTCACTTGGTTCTCTCACAAGTACTTGGCCACCAAGAAGACTCTCGAAGACGTGCAAGGAAGGGCCTTGAACCTCTTGGACACGCTCAAGAAGGTTAAGGGCCAAGCCAGGGTTCGAGCACTTCAAGATCTAAGGAACCTCGTTGGTTCTCACGTGAGTGCAAGGAAGACCGTTGAGGAAAATGGAGGGGTTGGTTTGGTTTTTAATTTGTTGGGTCCTTTCACTTCCCATGCTGTTGGGTGTGAAGCTGTTGGGATTATAGTGAGTTTGGATTTGAGTTCTGAGTTCAAGGGGAGTCTCATGCATCCTGCTAAGGTCTCATTGTTGGTGGATATCATGAACGAGGGAACCATTGAGACAAAAATGAACTGTGCCAAGTTGATTGAGATGTTGTTGTTGATGGAACAAGGGAATAATGGGACTAATGTTGTCTCAAGTTTGAGTCTTTTAGTTGGGTTGTTGAGGCTAGTGAGGGATAAGAAACACCCAACTGGGGTCTCAACTGGTCTTGTGTTACTCAAGGCTATAATATGTTCCCATGAATCAGTTAGAAGCTCGGTGATTAGCCTAGGAGCAATTCCTCTATTGATTGAGCTTTTGCCTAGTCTGAGTAATGACTGTTTGGAGATAGCACTTTACATTGTTGAGGTGTTGTCAACACTTCCGGAGGGAAAAATGGCTTTGAAAGAATGTCCAAACATTGTTCCCAATGTGGTCAAGTTGCTGATGAGAGTCTCTGAGAGGTGCACTCAGTTTGCATTGTCTATATTGTGGGCTATTTACAAGCTTGCCCCTGAGGAATGTGCCTCACAGGCTGTGGAGGCTGGTTTGGCTGCAAAGCTTCTGTTGTTTCTACTCATCCATGCTGTTTTCTCCCTACAAAGAAGTGATGTTATTGAAATTTAG 1200 0.4558 MPWYKPSNERKDEDVKIEAGVDLKVIIEELEPIDVPCVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDAVTPNTTLSHLILTWFSHKYLATKKTLEDVQGRALNLLDTLKKVKGQARVRALQDLRNLVGSHVSARKTVEENGGVGLVFNLLGPFTSHAVGCEAVGIIVSLDLSSEFKGSLMHPAKVSLLVDIMNEGTIETKMNCAKLIEMLLLMEQGNNGTNVVSSLSLLVGLLRLVRDKKHPTGVSTGLVLLKAIICSHESVRSSVISLGAIPLLIELLPSLSNDCLEIALYIVEVLSTLPEGKMALKECPNIVPNVVKLLMRVSERCTQFALSILWAIYKLAPEECASQAVEAGLAAKLLLFLLIHAVFSLQRSDVIEI 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr16036g00001 399 PANTHER WDSAM1 PROTEIN 29 383 IPR045185 GO:0061630
Mupr16036g00001 399 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 26 117 IPR013083 -
Mupr16036g00001 399 CDD RING-Ubox_PUB 36 86 IPR045210 -
Mupr16036g00001 399 SMART Ubox_2 38 101 IPR003613 GO:0004842|GO:0016567
Mupr16036g00001 399 Gene3D - 244 395 IPR011989 -
Mupr16036g00001 399 Pfam U-box domain 35 105 IPR003613 GO:0004842|GO:0016567
Mupr16036g00001 399 ProSiteProfiles U-box domain profile. 34 108 IPR003613 GO:0004842|GO:0016567
Mupr16036g00001 399 Gene3D - 118 243 IPR011989 -
Mupr16036g00001 399 SUPERFAMILY ARM repeat 125 380 IPR016024 -
Mupr16036g00001 399 SUPERFAMILY RING/U-box 29 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr16036g00001 Mupr-Chr16036 2802 4384 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr16036g00001 21 383 U-box Gene Family AT3G49810 62.259 5.72e-159 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr16036g00001 - - gmx:100803878 587.415